We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2f4
ModelE2F4_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnSGCGSSvvnKbbvvdn
Best auROC (human)0.957
Best auROC (mouse)0.989
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)37
Aligned words487
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
MGIMGI:103012
EntrezGeneGeneID:104394
(SSTAR profile)
UniProt IDE2F4_MOUSE
UniProt ACQ8R0K9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.80821
0.0005 6.31686
0.0001 9.508560000000001
GTEx tissue expression atlas E2f4 expression
Motifs in JASPAR
MA0470.1 (E2F4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.08.063.03.023.023.087.010.014.056.0103.01.05.017.057.03.0
021.06.048.00.00.024.077.03.03.039.0262.06.00.02.013.02.0
031.03.00.00.06.065.00.00.025.0371.00.04.01.010.00.00.0
040.00.032.01.03.01.0435.010.00.00.00.00.01.00.02.01.0
051.00.03.00.00.00.01.00.04.0234.0221.010.01.05.04.02.0
060.01.05.00.09.046.0166.018.013.024.0187.05.00.02.010.00.0
073.08.08.03.036.012.023.02.0136.095.0130.07.05.04.013.01.0
0899.019.057.05.045.023.037.014.070.059.031.014.08.04.01.00.0
0978.040.071.033.015.019.030.041.048.025.030.023.01.011.09.012.0
1035.03.058.046.011.03.041.040.09.03.080.048.01.05.032.071.0
117.010.031.08.03.05.01.05.020.089.060.042.013.036.044.0112.0
126.03.029.05.05.028.073.034.010.028.083.015.02.050.041.074.0
1311.08.03.01.024.018.052.015.040.072.080.034.023.029.060.016.0
1463.05.025.05.037.014.059.017.084.049.043.019.02.015.034.015.0
1592.08.066.020.014.04.047.018.054.011.077.019.010.07.018.021.0
1653.043.054.020.04.03.016.07.032.064.082.030.05.024.021.028.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.832-1.30.723-2.206-0.274-0.2741.044-1.086-0.760.6061.212-3.099-1.742-0.5710.624-2.206
02-3.099-1.5720.453-4.377-4.377-0.2320.923-2.206-2.2060.2472.144-1.572-4.377-2.556-0.832-2.556
03-3.099-2.206-4.377-4.377-1.5720.754-4.377-4.377-0.1922.491-4.377-1.948-3.099-1.086-4.377-4.377
04-4.377-4.3770.051-3.099-2.206-3.0992.65-1.086-4.377-4.377-4.377-4.377-3.099-4.377-2.556-3.099
05-3.099-4.377-2.206-4.377-4.377-4.377-3.099-4.377-1.9482.0311.974-1.086-3.099-1.742-1.948-2.556
06-4.377-3.099-1.742-4.377-1.1870.4111.688-0.515-0.832-0.2321.807-1.742-4.377-2.556-1.086-4.377
07-2.206-1.3-1.3-2.2060.168-0.91-0.274-2.5561.4891.1321.444-1.427-1.742-1.948-0.832-3.099
081.173-0.4620.624-1.7420.389-0.2740.195-0.760.8280.6580.02-0.76-1.3-1.948-3.099-4.377
090.9350.2720.8420.082-0.693-0.462-0.0120.2970.453-0.192-0.012-0.274-3.099-0.994-1.187-0.91
100.14-2.2060.6410.411-0.994-2.2060.2970.272-1.187-2.2060.9610.453-3.099-1.7420.0510.842
11-1.427-1.0860.02-1.3-2.206-1.742-3.099-1.742-0.4111.0670.6740.321-0.8320.1680.3671.296
12-1.572-2.206-0.046-1.742-1.742-0.080.8690.111-1.086-0.080.997-0.693-2.5560.4930.2970.883
13-0.994-1.3-2.206-3.099-0.232-0.5150.532-0.6930.2720.8560.9610.111-0.274-0.0460.674-0.63
140.723-1.742-0.192-1.7420.195-0.760.658-0.5711.0090.4730.344-0.462-2.556-0.6930.111-0.693
151.1-1.30.769-0.411-0.76-1.9480.432-0.5150.57-0.9940.923-0.462-1.086-1.427-0.515-0.364
160.5510.3440.57-0.411-1.948-2.206-0.63-1.4270.0510.7390.985-0.012-1.742-0.232-0.364-0.08