We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2f4
ModelE2F4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusvRddGGCGGGRvnn
Best auROC (human)0.949
Best auROC (mouse)0.977
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)37
Aligned words500
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
MGIMGI:103012
EntrezGeneGeneID:104394
(SSTAR profile)
UniProt IDE2F4_MOUSE
UniProt ACQ8R0K9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.10826
0.0005 4.04846
0.0001 5.93946
GTEx tissue expression atlas E2f4 expression
Motifs in JASPAR
PCM
ACGT
01191.095.0137.077.0
02117.050.0302.031.0
03102.034.0276.088.0
04124.033.0265.078.0
0512.037.0450.01.0
066.04.0485.05.0
0713.0449.03.035.0
084.01.0479.016.0
091.024.0455.020.0
1034.05.0452.09.0
11289.024.0163.024.0
12198.0197.053.052.0
13151.0140.088.0121.0
14140.098.098.0164.0
PWM
ACGT
010.42-0.2710.091-0.477
02-0.065-0.8980.875-1.358
03-0.201-1.270.785-0.346
04-0.008-1.2980.745-0.464
05-2.234-1.1891.272-3.903
06-2.819-3.1261.347-2.961
07-2.1631.27-3.325-1.242
08-3.126-3.9031.334-1.975
09-3.903-1.61.283-1.77
10-1.27-2.9611.276-2.484
110.831-1.60.263-1.6
120.4550.45-0.841-0.86
130.1870.112-0.346-0.032
140.112-0.24-0.240.269