Model info
| Transcription factor | E2f4 | ||||||||
| Model | E2F4_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vRddGGCGGGRvnn | ||||||||
| Best auROC (human) | 0.949 | ||||||||
| Best auROC (mouse) | 0.977 | ||||||||
| Peak sets in benchmark (human) | 15 | ||||||||
| Peak sets in benchmark (mouse) | 37 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | E2F {3.3.2.1} | ||||||||
| MGI | MGI:103012 | ||||||||
| EntrezGene | GeneID:104394 (SSTAR profile) | ||||||||
| UniProt ID | E2F4_MOUSE | ||||||||
| UniProt AC | Q8R0K9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E2f4 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 191.0 | 95.0 | 137.0 | 77.0 |
| 02 | 117.0 | 50.0 | 302.0 | 31.0 |
| 03 | 102.0 | 34.0 | 276.0 | 88.0 |
| 04 | 124.0 | 33.0 | 265.0 | 78.0 |
| 05 | 12.0 | 37.0 | 450.0 | 1.0 |
| 06 | 6.0 | 4.0 | 485.0 | 5.0 |
| 07 | 13.0 | 449.0 | 3.0 | 35.0 |
| 08 | 4.0 | 1.0 | 479.0 | 16.0 |
| 09 | 1.0 | 24.0 | 455.0 | 20.0 |
| 10 | 34.0 | 5.0 | 452.0 | 9.0 |
| 11 | 289.0 | 24.0 | 163.0 | 24.0 |
| 12 | 198.0 | 197.0 | 53.0 | 52.0 |
| 13 | 151.0 | 140.0 | 88.0 | 121.0 |
| 14 | 140.0 | 98.0 | 98.0 | 164.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.42 | -0.271 | 0.091 | -0.477 |
| 02 | -0.065 | -0.898 | 0.875 | -1.358 |
| 03 | -0.201 | -1.27 | 0.785 | -0.346 |
| 04 | -0.008 | -1.298 | 0.745 | -0.464 |
| 05 | -2.234 | -1.189 | 1.272 | -3.903 |
| 06 | -2.819 | -3.126 | 1.347 | -2.961 |
| 07 | -2.163 | 1.27 | -3.325 | -1.242 |
| 08 | -3.126 | -3.903 | 1.334 | -1.975 |
| 09 | -3.903 | -1.6 | 1.283 | -1.77 |
| 10 | -1.27 | -2.961 | 1.276 | -2.484 |
| 11 | 0.831 | -1.6 | 0.263 | -1.6 |
| 12 | 0.455 | 0.45 | -0.841 | -0.86 |
| 13 | 0.187 | 0.112 | -0.346 | -0.032 |
| 14 | 0.112 | -0.24 | -0.24 | 0.269 |