We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2F6
(GeneCards)
ModelE2F6_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusnvRGMGGGARvv
Best auROC (human)0.896
Best auROC (mouse)
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)
Aligned words502
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3120
EntrezGeneGeneID:1876
(SSTAR profile)
UniProt IDE2F6_HUMAN
UniProt ACO75461
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.258420000000001
0.0005 10.257405
0.0001 14.24863
GTEx tissue expression atlas E2F6 expression
ReMap ChIP-seq dataset list E2F6 datasets
Motifs in JASPAR
MA0471.1 (E2F6; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0144.016.067.02.032.011.043.023.066.044.063.011.012.07.035.023.0
0234.019.0100.01.020.011.047.00.066.043.093.06.05.02.050.02.0
034.05.0114.02.02.01.070.02.07.013.0263.07.01.00.07.01.0
042.09.00.03.00.09.00.010.094.0319.04.037.05.05.00.02.0
0511.00.082.08.033.01.0286.022.00.00.03.01.02.01.048.01.0
061.01.044.00.00.01.01.00.010.06.0403.00.02.00.030.00.0
070.00.013.00.00.00.08.00.02.01.0475.00.00.00.00.00.0
082.00.00.00.01.00.00.00.0492.03.01.00.00.00.00.00.0
09311.011.0169.04.01.00.02.00.01.00.00.00.00.00.00.00.0
10131.036.0117.029.01.05.03.02.057.031.061.022.00.00.02.02.0
1161.043.073.012.013.019.032.08.045.050.063.025.09.014.018.014.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.341-0.6560.758-2.5820.025-1.020.318-0.30.7430.3410.697-1.02-0.936-1.4520.114-0.3
020.085-0.4881.157-3.124-0.437-1.020.406-4.3980.7430.3181.084-1.598-1.768-2.5820.467-2.582
03-1.973-1.7681.287-2.582-2.582-3.1240.802-2.582-1.452-0.8582.121-1.452-3.124-4.398-1.452-3.124
04-2.582-1.213-4.398-2.232-4.398-1.213-4.398-1.1121.0952.314-1.9730.169-1.768-1.768-4.398-2.582
05-1.02-4.3980.959-1.3260.056-3.1242.205-0.344-4.398-4.398-2.232-3.124-2.582-3.1240.427-3.124
06-3.124-3.1240.341-4.398-4.398-3.124-3.124-4.398-1.112-1.5982.548-4.398-2.582-4.398-0.038-4.398
07-4.398-4.398-0.858-4.398-4.398-4.398-1.326-4.398-2.582-3.1242.712-4.398-4.398-4.398-4.398-4.398
08-2.582-4.398-4.398-4.398-3.124-4.398-4.398-4.3982.747-2.232-3.124-4.398-4.398-4.398-4.398-4.398
092.289-1.021.68-1.973-3.124-4.398-2.582-4.398-3.124-4.398-4.398-4.398-4.398-4.398-4.398-4.398
101.4260.1421.313-0.072-3.124-1.768-2.232-2.5820.597-0.0060.665-0.344-4.398-4.398-2.582-2.582
110.6650.3180.843-0.936-0.858-0.4880.025-1.3260.3630.4670.697-0.218-1.213-0.786-0.541-0.786