We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorE2F6
(GeneCards)
ModelE2F6_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusdRRGMGGGARvvv
Best auROC (human)0.902
Best auROC (mouse)
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)
Aligned words500
TF familyE2F-related factors {3.3.2}
TF subfamilyE2F {3.3.2.1}
HGNCHGNC:3120
EntrezGeneGeneID:1876
(SSTAR profile)
UniProt IDE2F6_HUMAN
UniProt ACO75461
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.08261
0.0005 4.97356
0.0001 6.791360000000001
GTEx tissue expression atlas E2F6 expression
ReMap ChIP-seq dataset list E2F6 datasets
Motifs in JASPAR
MA0471.1 (E2F6; Homo sapiens)
PCM
ACGT
01169.074.0171.086.0
02131.017.0278.074.0
0377.063.0350.010.0
045.08.0482.05.0
05107.0354.06.033.0
0620.09.0447.024.0
0712.024.0448.016.0
0836.022.0436.06.0
09471.016.07.06.0
10256.018.0218.08.0
11192.054.0219.035.0
12139.0109.0189.063.0
13138.081.0213.068.0
PWM
ACGT
010.298-0.5160.31-0.368
020.046-1.920.793-0.516
03-0.477-0.6731.022-2.394
04-2.961-2.5841.34-2.961
05-0.1531.033-2.819-1.298
06-1.77-2.4841.265-1.6
07-2.234-1.61.268-1.975
08-1.215-1.6811.241-2.819
091.317-1.975-2.694-2.819
100.711-1.8680.551-2.584
110.425-0.8230.555-1.242
120.105-0.1350.409-0.673
130.098-0.4270.528-0.599