Model info
| Transcription factor | E4F1 (GeneCards) | ||||||||
| Model | E4F1_HUMAN.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 9 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nGTGACGTM | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 9 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| HGNC | HGNC:3121 | ||||||||
| EntrezGene | GeneID:1877 (SSTAR profile) | ||||||||
| UniProt ID | E4F1_HUMAN | ||||||||
| UniProt AC | Q66K89 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | E4F1 expression | ||||||||
| ReMap ChIP-seq dataset list | E4F1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.52 | 3.831 | 1.52 | 2.128 |
| 02 | 0.608 | 0.0 | 7.297 | 1.095 |
| 03 | 0.0 | 0.0 | 0.0 | 9.0 |
| 04 | 0.0 | 0.0 | 4.743 | 4.257 |
| 05 | 9.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 9.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 9.0 | 0.0 |
| 08 | 1.216 | 0.0 | 0.0 | 7.784 |
| 09 | 1.672 | 5.199 | 1.064 | 1.064 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.302 | 0.448 | -0.302 | -0.044 |
| 02 | -0.883 | -1.628 | 1.031 | -0.532 |
| 03 | -1.628 | -1.628 | -1.628 | 1.227 |
| 04 | -1.628 | -1.628 | 0.637 | 0.541 |
| 05 | 1.227 | -1.628 | -1.628 | -1.628 |
| 06 | -1.628 | 1.227 | -1.628 | -1.628 |
| 07 | -1.628 | -1.628 | 1.227 | -1.628 |
| 08 | -0.461 | -1.628 | -1.628 | 1.091 |
| 09 | -0.231 | 0.72 | -0.551 | -0.551 |