We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEGR2
(GeneCards)
ModelEGR2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusvdvdGhGKGGGYGKvdvnddn
Best auROC (human)0.989
Best auROC (mouse)0.987
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)25
Aligned words625
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilyEGR factors {2.3.1.3}
HGNCHGNC:3239
EntrezGeneGeneID:1959
(SSTAR profile)
UniProt IDEGR2_HUMAN
UniProt ACP11161
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.68521
0.0005 6.881960000000001
0.0001 11.48141
GTEx tissue expression atlas EGR2 expression
ReMap ChIP-seq dataset list EGR2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0125.017.037.011.025.021.033.020.042.024.0102.045.011.013.033.014.0
0235.023.032.013.017.021.021.016.066.041.083.015.012.013.060.05.0
0320.013.070.027.010.018.028.042.028.023.071.074.012.07.019.011.0
0412.04.053.01.013.010.036.02.017.08.0158.05.09.011.0131.03.0
0518.018.03.012.05.010.01.017.087.0191.03.097.02.05.01.03.0
061.01.0109.01.00.01.0221.02.00.01.07.00.02.00.0126.01.0
070.00.01.02.00.00.00.03.04.04.0165.0290.01.00.01.02.0
080.00.04.01.00.00.04.00.033.01.0130.03.011.02.0281.03.0
090.00.044.00.00.00.02.01.01.03.0402.013.00.00.07.00.0
100.00.01.00.00.01.02.00.00.03.0449.03.00.00.014.00.0
110.00.00.00.02.01.00.01.091.0229.00.0146.00.02.01.00.0
123.00.088.02.09.00.0215.08.00.00.01.00.02.00.0136.09.0
131.01.010.02.00.00.00.00.026.014.0299.0101.01.00.013.05.0
1410.04.013.01.00.02.08.05.0105.055.0122.040.018.015.061.014.0
1527.08.081.017.024.017.014.021.044.024.074.062.010.011.030.09.0
1625.013.055.012.016.014.017.013.040.042.093.024.010.017.070.012.0
1725.014.038.014.018.018.021.029.059.042.067.067.03.013.034.011.0
1823.011.052.019.022.022.022.021.030.031.064.035.013.015.081.012.0
1921.013.038.016.022.010.022.025.025.032.0104.058.020.06.049.012.0
2012.029.038.09.016.012.020.013.061.051.067.034.012.018.057.024.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.165-0.5440.222-0.967-0.165-0.3370.109-0.3850.347-0.2051.2290.416-0.967-0.8050.109-0.733
020.167-0.2470.078-0.805-0.544-0.337-0.337-0.6030.7960.3231.024-0.666-0.883-0.8050.701-1.716
03-0.385-0.8050.855-0.089-1.059-0.488-0.0540.347-0.054-0.2470.8690.91-0.883-1.4-0.435-0.967
04-0.883-1.9210.578-3.074-0.805-1.0590.195-2.53-0.544-1.2731.666-1.716-1.16-0.9671.479-2.18
05-0.488-0.488-2.18-0.883-1.716-1.059-3.074-0.5441.0711.855-2.181.179-2.53-1.716-3.074-2.18
06-3.074-3.0741.295-3.074-4.354-3.0742.0-2.53-4.354-3.074-1.4-4.354-2.53-4.3541.44-3.074
07-4.354-4.354-3.074-2.53-4.354-4.354-4.354-2.18-1.921-1.9211.7092.272-3.074-4.354-3.074-2.53
08-4.354-4.354-1.921-3.074-4.354-4.354-1.921-4.3540.109-3.0741.471-2.18-0.967-2.532.24-2.18
09-4.354-4.3540.393-4.354-4.354-4.354-2.53-3.074-3.074-2.182.598-0.805-4.354-4.354-1.4-4.354
10-4.354-4.354-3.074-4.354-4.354-3.074-2.53-4.354-4.354-2.182.708-2.18-4.354-4.354-0.733-4.354
11-4.354-4.354-4.354-4.354-2.53-3.074-4.354-3.0741.1162.036-4.3541.587-4.354-2.53-3.074-4.354
12-2.18-4.3541.082-2.53-1.16-4.3541.973-1.273-4.354-4.354-3.074-4.354-2.53-4.3541.516-1.16
13-3.074-3.074-1.059-2.53-4.354-4.354-4.354-4.354-0.127-0.7332.3021.219-3.074-4.354-0.805-1.716
14-1.059-1.921-0.805-3.074-4.354-2.53-1.273-1.7161.2580.6151.4080.299-0.488-0.6660.718-0.733
15-0.089-1.2731.0-0.544-0.205-0.544-0.733-0.3370.393-0.2050.910.734-1.059-0.9670.015-1.16
16-0.165-0.8050.615-0.883-0.603-0.733-0.544-0.8050.2990.3471.137-0.205-1.059-0.5440.855-0.883
17-0.165-0.7330.248-0.733-0.488-0.488-0.337-0.0190.6850.3470.8110.811-2.18-0.8050.138-0.967
18-0.247-0.9670.559-0.435-0.291-0.291-0.291-0.3370.0150.0470.7650.167-0.805-0.6661.0-0.883
19-0.337-0.8050.248-0.603-0.291-1.059-0.291-0.165-0.1650.0781.2490.668-0.385-1.5460.5-0.883
20-0.883-0.0190.248-1.16-0.603-0.883-0.385-0.8050.7180.540.8110.138-0.883-0.4880.65-0.205