We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEGR3
(GeneCards)
ModelEGR3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
D
Motif rank
0
ConsensusWRMGTGGGTGb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilyEGR factors {2.3.1.3}
HGNCHGNC:3240
EntrezGeneGeneID:1960
(SSTAR profile)
UniProt IDEGR3_HUMAN
UniProt ACQ06889
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.718505
0.0005 5.358875
0.0001 6.743919999999999
GTEx tissue expression atlas EGR3 expression
ReMap ChIP-seq dataset list EGR3 datasets
Motifs in JASPAR
PCM
ACGT
014.5510.1450.1453.159
022.0870.04.7541.159
035.1011.7390.01.159
040.9280.07.0720.0
050.00.291.4496.261
060.00.08.00.0
070.00.07.0720.928
080.00.08.00.0
090.03.8260.04.174
100.00.07.0720.928
110.1451.3041.3045.246
PWM
ACGT
010.699-1.332-1.3320.379
020.034-1.5780.738-0.406
030.802-0.109-1.578-0.406
04-0.554-1.5781.103-1.578
05-1.578-1.135-0.2470.99
06-1.578-1.5781.218-1.578
07-1.578-1.5781.103-0.554
08-1.578-1.5781.218-1.578
09-1.5780.545-1.5780.622
10-1.578-1.5781.103-0.554
11-1.332-0.323-0.3230.828