Transcription factor | EGR3 (GeneCards) | ||||||||
Model | EGR3_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | Integrative | ||||||||
Model release | HOCOMOCOv9 | ||||||||
Model length | 11 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | WRMGTGGGTGb | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 8 | ||||||||
TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
TF subfamily | EGR factors {2.3.1.3} | ||||||||
HGNC | HGNC:3240 | ||||||||
EntrezGene | GeneID:1960 (SSTAR profile) | ||||||||
UniProt ID | EGR3_HUMAN | ||||||||
UniProt AC | Q06889 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | EGR3 expression | ||||||||
ReMap ChIP-seq dataset list | EGR3 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 4.551 | 0.145 | 0.145 | 3.159 |
02 | 2.087 | 0.0 | 4.754 | 1.159 |
03 | 5.101 | 1.739 | 0.0 | 1.159 |
04 | 0.928 | 0.0 | 7.072 | 0.0 |
05 | 0.0 | 0.29 | 1.449 | 6.261 |
06 | 0.0 | 0.0 | 8.0 | 0.0 |
07 | 0.0 | 0.0 | 7.072 | 0.928 |
08 | 0.0 | 0.0 | 8.0 | 0.0 |
09 | 0.0 | 3.826 | 0.0 | 4.174 |
10 | 0.0 | 0.0 | 7.072 | 0.928 |
11 | 0.145 | 1.304 | 1.304 | 5.246 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.699 | -1.332 | -1.332 | 0.379 |
02 | 0.034 | -1.578 | 0.738 | -0.406 |
03 | 0.802 | -0.109 | -1.578 | -0.406 |
04 | -0.554 | -1.578 | 1.103 | -1.578 |
05 | -1.578 | -1.135 | -0.247 | 0.99 |
06 | -1.578 | -1.578 | 1.218 | -1.578 |
07 | -1.578 | -1.578 | 1.103 | -0.554 |
08 | -1.578 | -1.578 | 1.218 | -1.578 |
09 | -1.578 | 0.545 | -1.578 | 0.622 |
10 | -1.578 | -1.578 | 1.103 | -0.554 |
11 | -1.332 | -0.323 | -0.323 | 0.828 |