Model info
| Transcription factor | Egr3 | ||||||||
| Model | EGR3_MOUSE.H11MO.0.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | WRMGTGGGTGb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 8 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors {2.3.1} | ||||||||
| TF subfamily | EGR factors {2.3.1.3} | ||||||||
| MGI | MGI:1306780 | ||||||||
| EntrezGene | GeneID:13655 (SSTAR profile) | ||||||||
| UniProt ID | EGR3_MOUSE | ||||||||
| UniProt AC | P43300 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Egr3 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.551 | 0.145 | 0.145 | 3.159 |
| 02 | 2.087 | 0.0 | 4.754 | 1.159 |
| 03 | 5.101 | 1.739 | 0.0 | 1.159 |
| 04 | 0.928 | 0.0 | 7.072 | 0.0 |
| 05 | 0.0 | 0.29 | 1.449 | 6.261 |
| 06 | 0.0 | 0.0 | 8.0 | 0.0 |
| 07 | 0.0 | 0.0 | 7.072 | 0.928 |
| 08 | 0.0 | 0.0 | 8.0 | 0.0 |
| 09 | 0.0 | 3.826 | 0.0 | 4.174 |
| 10 | 0.0 | 0.0 | 7.072 | 0.928 |
| 11 | 0.145 | 1.304 | 1.304 | 5.246 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.699 | -1.332 | -1.332 | 0.379 |
| 02 | 0.034 | -1.578 | 0.738 | -0.406 |
| 03 | 0.802 | -0.109 | -1.578 | -0.406 |
| 04 | -0.554 | -1.578 | 1.103 | -1.578 |
| 05 | -1.578 | -1.135 | -0.247 | 0.99 |
| 06 | -1.578 | -1.578 | 1.218 | -1.578 |
| 07 | -1.578 | -1.578 | 1.103 | -0.554 |
| 08 | -1.578 | -1.578 | 1.218 | -1.578 |
| 09 | -1.578 | 0.545 | -1.578 | 0.622 |
| 10 | -1.578 | -1.578 | 1.103 | -0.554 |
| 11 | -1.332 | -0.323 | -0.323 | 0.828 |