We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEHF
(GeneCards)
ModelEHF_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
B
Motif rank
0
ConsensusndAbSAGGAAGYdvv
Best auROC (human)0.966
Best auROC (mouse)0.654
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)3
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyEHF-like factors {3.5.2.4}
HGNCHGNC:3246
EntrezGeneGeneID:26298
(SSTAR profile)
UniProt IDEHF_HUMAN
UniProt ACQ9NZC4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.5522099999999996
0.0005 4.83746
0.0001 7.609660000000001
GTEx tissue expression atlas EHF expression
ReMap ChIP-seq dataset list EHF datasets
Motifs in JASPAR
MA0598.1 (EHF; Homo sapiens)
MA0598.2 (EHF; Homo sapiens)
PCM
ACGT
01125.0104.0192.079.0
02223.078.083.0116.0
03422.03.04.071.0
0471.0225.096.0108.0
0597.0256.0147.00.0
06377.0114.09.00.0
070.00.0500.00.0
081.00.0499.00.0
09499.00.01.00.0
10499.00.00.01.0
11113.04.0383.00.0
1216.092.021.0371.0
13135.051.0203.0111.0
14125.0123.0204.048.0
1584.0180.0177.059.0
PWM
ACGT
010.0-0.1810.425-0.452
020.573-0.464-0.403-0.074
031.208-3.325-3.126-0.556
04-0.5560.582-0.26-0.144
05-0.250.7110.16-4.4
061.096-0.091-2.484-4.4
07-4.4-4.41.377-4.4
08-3.903-4.41.375-4.4
091.375-4.4-3.903-4.4
101.375-4.4-4.4-3.903
11-0.1-3.1261.111-4.4
12-1.975-0.302-1.7251.08
130.076-0.8790.48-0.117
140.0-0.0160.485-0.938
15-0.3920.3610.344-0.737