We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorELF1
(GeneCards)
ModelELF1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnvdWbSMGGAAGYvv
Best auROC (human)0.992
Best auROC (mouse)0.977
Peak sets in benchmark (human)43
Peak sets in benchmark (mouse)5
Aligned words403
TF familyEts-related factors {3.5.2}
TF subfamilyElf-1-like factors {3.5.2.3}
HGNCHGNC:3316
EntrezGeneGeneID:1997
(SSTAR profile)
UniProt IDELF1_HUMAN
UniProt ACP32519
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.05376
0.0005 9.92501
0.0001 13.71536
GTEx tissue expression atlas ELF1 expression
ReMap ChIP-seq dataset list ELF1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0128.019.042.07.038.017.042.015.026.020.080.013.07.010.027.012.0
0246.015.022.016.030.013.012.011.0115.019.036.021.016.07.015.09.0
03148.014.026.019.024.02.011.017.049.011.017.08.019.04.011.023.0
0436.0109.044.051.06.019.04.02.013.017.028.07.04.029.019.015.0
055.037.013.04.012.0144.013.05.07.038.046.04.010.019.045.01.0
066.023.05.00.078.0154.04.02.031.083.03.00.08.01.04.01.0
071.00.0120.02.03.01.0247.010.00.00.015.01.00.00.02.01.0
080.01.03.00.00.00.01.00.04.01.0379.00.00.00.013.01.0
092.00.00.02.02.00.00.00.0387.06.03.00.01.00.00.00.0
10372.01.07.012.05.01.00.00.02.01.00.00.02.00.00.00.0
1145.016.0315.05.00.01.02.00.01.02.04.00.00.04.08.00.0
1212.05.00.029.05.010.00.08.039.074.023.0193.01.01.02.01.0
138.010.034.05.019.029.031.011.08.07.010.00.035.041.0126.029.0
1421.07.036.06.012.028.031.016.035.057.083.026.06.05.027.07.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.104-0.2770.505-1.2430.406-0.3860.505-0.5080.031-0.2271.146-0.648-1.243-0.9020.069-0.725
020.596-0.508-0.133-0.4450.172-0.648-0.725-0.811.507-0.2770.353-0.179-0.445-1.243-0.508-1.003
031.759-0.5760.031-0.277-0.048-2.376-0.81-0.3860.658-0.81-0.386-1.116-0.277-1.765-0.81-0.089
040.3531.4540.5520.698-1.389-0.277-1.765-2.376-0.648-0.3860.104-1.243-1.7650.139-0.277-0.508
05-1.5590.38-0.648-1.765-0.7251.731-0.648-1.559-1.2430.4060.596-1.765-0.902-0.2770.574-2.923
06-1.389-0.089-1.559-4.2221.121.798-1.765-2.3760.2051.182-2.025-4.222-1.116-2.923-1.765-2.923
07-2.923-4.2221.549-2.376-2.025-2.9232.27-0.902-4.222-4.222-0.508-2.923-4.222-4.222-2.376-2.923
08-4.222-2.923-2.025-4.222-4.222-4.222-2.923-4.222-1.765-2.9232.697-4.222-4.222-4.222-0.648-2.923
09-2.376-4.222-4.222-2.376-2.376-4.222-4.222-4.2222.718-1.389-2.025-4.222-2.923-4.222-4.222-4.222
102.679-2.923-1.243-0.725-1.559-2.923-4.222-4.222-2.376-2.923-4.222-4.222-2.376-4.222-4.222-4.222
110.574-0.4452.513-1.559-4.222-2.923-2.376-4.222-2.923-2.376-1.765-4.222-4.222-1.765-1.116-4.222
12-0.725-1.559-4.2220.139-1.559-0.902-4.222-1.1160.4321.068-0.0892.024-2.923-2.923-2.376-2.923
13-1.116-0.9020.296-1.559-0.2770.1390.205-0.81-1.116-1.243-0.902-4.2220.3250.4821.5980.139
14-0.179-1.2430.353-1.389-0.7250.1040.205-0.4450.3250.8081.1820.031-1.389-1.5590.069-1.243