We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorELF1
(GeneCards)
ModelELF1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusvvdvSMGGAAGYvv
Best auROC (human)0.992
Best auROC (mouse)0.975
Peak sets in benchmark (human)43
Peak sets in benchmark (mouse)5
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyElf-1-like factors {3.5.2.3}
HGNCHGNC:3316
EntrezGeneGeneID:1997
(SSTAR profile)
UniProt IDELF1_HUMAN
UniProt ACP32519
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.42736
0.0005 4.57166
0.0001 6.8041100000000005
GTEx tissue expression atlas ELF1 expression
ReMap ChIP-seq dataset list ELF1 datasets
Motifs in JASPAR
PCM
ACGT
01125.0126.0201.048.0
02229.076.0134.061.0
03287.044.064.0105.0
04109.0231.095.065.0
0551.0339.0104.06.0
06150.0337.08.05.0
070.00.0500.00.0
083.00.0497.00.0
09499.00.00.01.0
10494.00.01.05.0
1158.016.0420.06.0
1268.082.022.0328.0
1379.078.0289.054.0
1463.0170.0231.036.0
PWM
ACGT
010.00.0080.47-0.938
020.6-0.490.069-0.705
030.824-1.022-0.658-0.172
04-0.1350.608-0.271-0.643
05-0.8790.99-0.181-2.819
060.180.984-2.584-2.961
07-4.4-4.41.377-4.4
08-3.325-4.41.371-4.4
091.375-4.4-4.4-3.903
101.365-4.4-3.903-2.961
11-0.754-1.9751.203-2.819
12-0.599-0.415-1.6810.957
13-0.452-0.4640.831-0.823
14-0.6730.3040.608-1.215