Model info
| Transcription factor | ELF1 (GeneCards) | ||||||||
| Model | ELF1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvdvSMGGAAGYvv | ||||||||
| Best auROC (human) | 0.992 | ||||||||
| Best auROC (mouse) | 0.975 | ||||||||
| Peak sets in benchmark (human) | 43 | ||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elf-1-like factors {3.5.2.3} | ||||||||
| HGNC | HGNC:3316 | ||||||||
| EntrezGene | GeneID:1997 (SSTAR profile) | ||||||||
| UniProt ID | ELF1_HUMAN | ||||||||
| UniProt AC | P32519 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ELF1 expression | ||||||||
| ReMap ChIP-seq dataset list | ELF1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 125.0 | 126.0 | 201.0 | 48.0 |
| 02 | 229.0 | 76.0 | 134.0 | 61.0 |
| 03 | 287.0 | 44.0 | 64.0 | 105.0 |
| 04 | 109.0 | 231.0 | 95.0 | 65.0 |
| 05 | 51.0 | 339.0 | 104.0 | 6.0 |
| 06 | 150.0 | 337.0 | 8.0 | 5.0 |
| 07 | 0.0 | 0.0 | 500.0 | 0.0 |
| 08 | 3.0 | 0.0 | 497.0 | 0.0 |
| 09 | 499.0 | 0.0 | 0.0 | 1.0 |
| 10 | 494.0 | 0.0 | 1.0 | 5.0 |
| 11 | 58.0 | 16.0 | 420.0 | 6.0 |
| 12 | 68.0 | 82.0 | 22.0 | 328.0 |
| 13 | 79.0 | 78.0 | 289.0 | 54.0 |
| 14 | 63.0 | 170.0 | 231.0 | 36.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.0 | 0.008 | 0.47 | -0.938 |
| 02 | 0.6 | -0.49 | 0.069 | -0.705 |
| 03 | 0.824 | -1.022 | -0.658 | -0.172 |
| 04 | -0.135 | 0.608 | -0.271 | -0.643 |
| 05 | -0.879 | 0.99 | -0.181 | -2.819 |
| 06 | 0.18 | 0.984 | -2.584 | -2.961 |
| 07 | -4.4 | -4.4 | 1.377 | -4.4 |
| 08 | -3.325 | -4.4 | 1.371 | -4.4 |
| 09 | 1.375 | -4.4 | -4.4 | -3.903 |
| 10 | 1.365 | -4.4 | -3.903 | -2.961 |
| 11 | -0.754 | -1.975 | 1.203 | -2.819 |
| 12 | -0.599 | -0.415 | -1.681 | 0.957 |
| 13 | -0.452 | -0.464 | 0.831 | -0.823 |
| 14 | -0.673 | 0.304 | 0.608 | -1.215 |