Transcription factor | Elf1 | ||||||||
Model | ELF1_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vvdnSCGGAAGYvv | ||||||||
Best auROC (human) | 0.993 | ||||||||
Best auROC (mouse) | 0.979 | ||||||||
Peak sets in benchmark (human) | 43 | ||||||||
Peak sets in benchmark (mouse) | 5 | ||||||||
Aligned words | 502 | ||||||||
TF family | Ets-related factors {3.5.2} | ||||||||
TF subfamily | Elf-1-like factors {3.5.2.3} | ||||||||
MGI | MGI:107180 | ||||||||
EntrezGene | GeneID:13709 (SSTAR profile) | ||||||||
UniProt ID | ELF1_MOUSE | ||||||||
UniProt AC | Q60775 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Elf1 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 64.0 | 13.0 | 39.0 | 6.0 | 40.0 | 23.0 | 31.0 | 16.0 | 99.0 | 18.0 | 64.0 | 24.0 | 21.0 | 11.0 | 24.0 | 7.0 |
02 | 129.0 | 18.0 | 46.0 | 31.0 | 24.0 | 1.0 | 15.0 | 25.0 | 106.0 | 15.0 | 23.0 | 14.0 | 17.0 | 3.0 | 12.0 | 21.0 |
03 | 81.0 | 104.0 | 62.0 | 29.0 | 7.0 | 11.0 | 13.0 | 6.0 | 31.0 | 14.0 | 40.0 | 11.0 | 13.0 | 39.0 | 19.0 | 20.0 |
04 | 15.0 | 63.0 | 49.0 | 5.0 | 6.0 | 151.0 | 9.0 | 2.0 | 4.0 | 54.0 | 76.0 | 0.0 | 6.0 | 43.0 | 16.0 | 1.0 |
05 | 9.0 | 20.0 | 1.0 | 1.0 | 66.0 | 241.0 | 4.0 | 0.0 | 16.0 | 131.0 | 1.0 | 2.0 | 6.0 | 2.0 | 0.0 | 0.0 |
06 | 0.0 | 0.0 | 97.0 | 0.0 | 1.0 | 0.0 | 393.0 | 0.0 | 0.0 | 0.0 | 6.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 |
07 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 498.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
08 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 497.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
09 | 495.0 | 1.0 | 0.0 | 2.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
10 | 31.0 | 12.0 | 453.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 |
11 | 3.0 | 13.0 | 2.0 | 13.0 | 1.0 | 3.0 | 0.0 | 8.0 | 44.0 | 121.0 | 12.0 | 279.0 | 1.0 | 0.0 | 0.0 | 0.0 |
12 | 12.0 | 8.0 | 27.0 | 2.0 | 22.0 | 25.0 | 74.0 | 16.0 | 2.0 | 3.0 | 8.0 | 1.0 | 43.0 | 45.0 | 187.0 | 25.0 |
13 | 24.0 | 14.0 | 37.0 | 4.0 | 17.0 | 15.0 | 31.0 | 18.0 | 45.0 | 81.0 | 143.0 | 27.0 | 3.0 | 6.0 | 28.0 | 7.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.711 | -0.86 | 0.219 | -1.6 | 0.244 | -0.302 | -0.008 | -0.658 | 1.145 | -0.543 | 0.711 | -0.26 | -0.392 | -1.022 | -0.26 | -1.454 |
02 | 1.408 | -0.543 | 0.383 | -0.008 | -0.26 | -3.126 | -0.721 | -0.22 | 1.213 | -0.721 | -0.302 | -0.788 | -0.599 | -2.234 | -0.938 | -0.392 |
03 | 0.945 | 1.194 | 0.679 | -0.074 | -1.454 | -1.022 | -0.86 | -1.6 | -0.008 | -0.788 | 0.244 | -1.022 | -0.86 | 0.219 | -0.49 | -0.439 |
04 | -0.721 | 0.695 | 0.445 | -1.77 | -1.6 | 1.565 | -1.215 | -2.584 | -1.975 | 0.542 | 0.881 | -4.4 | -1.6 | 0.316 | -0.658 | -3.126 |
05 | -1.215 | -0.439 | -3.126 | -3.126 | 0.741 | 2.032 | -1.975 | -4.4 | -0.658 | 1.424 | -3.126 | -2.584 | -1.6 | -2.584 | -4.4 | -4.4 |
06 | -4.4 | -4.4 | 1.124 | -4.4 | -3.126 | -4.4 | 2.52 | -4.4 | -4.4 | -4.4 | -1.6 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 |
07 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | 2.757 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
08 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | 2.755 | -3.126 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
09 | 2.751 | -3.126 | -4.4 | -2.584 | -3.126 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
10 | -0.008 | -0.938 | 2.662 | -3.126 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 |
11 | -2.234 | -0.86 | -2.584 | -0.86 | -3.126 | -2.234 | -4.4 | -1.328 | 0.339 | 1.345 | -0.938 | 2.178 | -3.126 | -4.4 | -4.4 | -4.4 |
12 | -0.938 | -1.328 | -0.144 | -2.584 | -0.346 | -0.22 | 0.855 | -0.658 | -2.584 | -2.234 | -1.328 | -3.126 | 0.316 | 0.361 | 1.779 | -0.22 |
13 | -0.26 | -0.788 | 0.167 | -1.975 | -0.599 | -0.721 | -0.008 | -0.543 | 0.361 | 0.945 | 1.511 | -0.144 | -2.234 | -1.6 | -0.108 | -1.454 |