We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorElf1
ModelELF1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusvvRvSCGGAAGYSv
Best auROC (human)0.992
Best auROC (mouse)0.975
Peak sets in benchmark (human)43
Peak sets in benchmark (mouse)5
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyElf-1-like factors {3.5.2.3}
MGIMGI:107180
EntrezGeneGeneID:13709
(SSTAR profile)
UniProt IDELF1_MOUSE
UniProt ACQ60775
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.4664599999999997
0.0005 3.6548599999999998
0.0001 6.09421
GTEx tissue expression atlas Elf1 expression
Motifs in JASPAR
MA0473.1 (ELF1; Homo sapiens)
MA0473.2 (ELF1; Homo sapiens)
PCM
ACGT
01106.0141.0223.030.0
02242.077.0128.053.0
03304.045.077.074.0
0491.0240.0112.057.0
0510.0340.0148.02.0
0688.0407.01.04.0
070.00.0499.01.0
081.01.0498.00.0
09496.02.00.02.0
10499.01.00.00.0
1148.08.0443.01.0
1237.0124.020.0319.0
1371.083.0308.038.0
1481.0125.0245.049.0
PWM
ACGT
01-0.1630.1190.573-1.389
020.655-0.4770.023-0.841
030.881-1.0-0.477-0.516
04-0.3130.646-0.108-0.771
05-2.3940.9930.167-3.573
06-0.3461.172-3.903-3.126
07-4.4-4.41.375-3.903
08-3.903-3.9031.373-4.4
091.369-3.573-4.4-3.573
101.375-3.903-4.4-4.4
11-0.938-2.5841.256-3.903
12-1.189-0.008-1.770.929
13-0.556-0.4030.894-1.163
14-0.4270.00.667-0.918