Transcription factor | Elf1 | ||||||||
Model | ELF1_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 14 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vvRvSCGGAAGYSv | ||||||||
Best auROC (human) | 0.992 | ||||||||
Best auROC (mouse) | 0.975 | ||||||||
Peak sets in benchmark (human) | 43 | ||||||||
Peak sets in benchmark (mouse) | 5 | ||||||||
Aligned words | 500 | ||||||||
TF family | Ets-related factors {3.5.2} | ||||||||
TF subfamily | Elf-1-like factors {3.5.2.3} | ||||||||
MGI | MGI:107180 | ||||||||
EntrezGene | GeneID:13709 (SSTAR profile) | ||||||||
UniProt ID | ELF1_MOUSE | ||||||||
UniProt AC | Q60775 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Elf1 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 106.0 | 141.0 | 223.0 | 30.0 |
02 | 242.0 | 77.0 | 128.0 | 53.0 |
03 | 304.0 | 45.0 | 77.0 | 74.0 |
04 | 91.0 | 240.0 | 112.0 | 57.0 |
05 | 10.0 | 340.0 | 148.0 | 2.0 |
06 | 88.0 | 407.0 | 1.0 | 4.0 |
07 | 0.0 | 0.0 | 499.0 | 1.0 |
08 | 1.0 | 1.0 | 498.0 | 0.0 |
09 | 496.0 | 2.0 | 0.0 | 2.0 |
10 | 499.0 | 1.0 | 0.0 | 0.0 |
11 | 48.0 | 8.0 | 443.0 | 1.0 |
12 | 37.0 | 124.0 | 20.0 | 319.0 |
13 | 71.0 | 83.0 | 308.0 | 38.0 |
14 | 81.0 | 125.0 | 245.0 | 49.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.163 | 0.119 | 0.573 | -1.389 |
02 | 0.655 | -0.477 | 0.023 | -0.841 |
03 | 0.881 | -1.0 | -0.477 | -0.516 |
04 | -0.313 | 0.646 | -0.108 | -0.771 |
05 | -2.394 | 0.993 | 0.167 | -3.573 |
06 | -0.346 | 1.172 | -3.903 | -3.126 |
07 | -4.4 | -4.4 | 1.375 | -3.903 |
08 | -3.903 | -3.903 | 1.373 | -4.4 |
09 | 1.369 | -3.573 | -4.4 | -3.573 |
10 | 1.375 | -3.903 | -4.4 | -4.4 |
11 | -0.938 | -2.584 | 1.256 | -3.903 |
12 | -1.189 | -0.008 | -1.77 | 0.929 |
13 | -0.556 | -0.403 | 0.894 | -1.163 |
14 | -0.427 | 0.0 | 0.667 | -0.918 |