Model info
| Transcription factor | Elf1 | ||||||||
| Model | ELF1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvRvSCGGAAGYSv | ||||||||
| Best auROC (human) | 0.992 | ||||||||
| Best auROC (mouse) | 0.975 | ||||||||
| Peak sets in benchmark (human) | 43 | ||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elf-1-like factors {3.5.2.3} | ||||||||
| MGI | MGI:107180 | ||||||||
| EntrezGene | GeneID:13709 (SSTAR profile) | ||||||||
| UniProt ID | ELF1_MOUSE | ||||||||
| UniProt AC | Q60775 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Elf1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 106.0 | 141.0 | 223.0 | 30.0 |
| 02 | 242.0 | 77.0 | 128.0 | 53.0 |
| 03 | 304.0 | 45.0 | 77.0 | 74.0 |
| 04 | 91.0 | 240.0 | 112.0 | 57.0 |
| 05 | 10.0 | 340.0 | 148.0 | 2.0 |
| 06 | 88.0 | 407.0 | 1.0 | 4.0 |
| 07 | 0.0 | 0.0 | 499.0 | 1.0 |
| 08 | 1.0 | 1.0 | 498.0 | 0.0 |
| 09 | 496.0 | 2.0 | 0.0 | 2.0 |
| 10 | 499.0 | 1.0 | 0.0 | 0.0 |
| 11 | 48.0 | 8.0 | 443.0 | 1.0 |
| 12 | 37.0 | 124.0 | 20.0 | 319.0 |
| 13 | 71.0 | 83.0 | 308.0 | 38.0 |
| 14 | 81.0 | 125.0 | 245.0 | 49.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.163 | 0.119 | 0.573 | -1.389 |
| 02 | 0.655 | -0.477 | 0.023 | -0.841 |
| 03 | 0.881 | -1.0 | -0.477 | -0.516 |
| 04 | -0.313 | 0.646 | -0.108 | -0.771 |
| 05 | -2.394 | 0.993 | 0.167 | -3.573 |
| 06 | -0.346 | 1.172 | -3.903 | -3.126 |
| 07 | -4.4 | -4.4 | 1.375 | -3.903 |
| 08 | -3.903 | -3.903 | 1.373 | -4.4 |
| 09 | 1.369 | -3.573 | -4.4 | -3.573 |
| 10 | 1.375 | -3.903 | -4.4 | -4.4 |
| 11 | -0.938 | -2.584 | 1.256 | -3.903 |
| 12 | -1.189 | -0.008 | -1.77 | 0.929 |
| 13 | -0.556 | -0.403 | 0.894 | -1.163 |
| 14 | -0.427 | 0.0 | 0.667 | -0.918 |