Transcription factor | ELF2 (GeneCards) | ||||||||
Model | ELF2_HUMAN.H11DI.0.C | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | vvdvSCGGAAGhvvn | ||||||||
Best auROC (human) | 0.899 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 501 | ||||||||
TF family | Ets-related factors {3.5.2} | ||||||||
TF subfamily | Elf-1-like factors {3.5.2.3} | ||||||||
HGNC | HGNC:3317 | ||||||||
EntrezGene | GeneID:1998 (SSTAR profile) | ||||||||
UniProt ID | ELF2_HUMAN | ||||||||
UniProt AC | Q15723 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ELF2 expression | ||||||||
ReMap ChIP-seq dataset list | ELF2 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 43.0 | 18.0 | 30.0 | 10.0 | 41.0 | 19.0 | 30.0 | 33.0 | 93.0 | 27.0 | 59.0 | 29.0 | 17.0 | 21.0 | 22.0 | 8.0 |
02 | 112.0 | 21.0 | 41.0 | 20.0 | 26.0 | 10.0 | 19.0 | 30.0 | 75.0 | 15.0 | 35.0 | 16.0 | 16.0 | 14.0 | 20.0 | 30.0 |
03 | 76.0 | 85.0 | 53.0 | 15.0 | 14.0 | 23.0 | 17.0 | 6.0 | 39.0 | 22.0 | 54.0 | 0.0 | 10.0 | 35.0 | 34.0 | 17.0 |
04 | 10.0 | 75.0 | 48.0 | 6.0 | 11.0 | 137.0 | 14.0 | 3.0 | 13.0 | 82.0 | 62.0 | 1.0 | 3.0 | 19.0 | 15.0 | 1.0 |
05 | 9.0 | 27.0 | 0.0 | 1.0 | 62.0 | 249.0 | 1.0 | 1.0 | 23.0 | 112.0 | 1.0 | 3.0 | 7.0 | 2.0 | 0.0 | 2.0 |
06 | 1.0 | 0.0 | 100.0 | 0.0 | 0.0 | 1.0 | 388.0 | 1.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 7.0 | 0.0 |
07 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 2.0 | 2.0 | 491.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 |
08 | 2.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 485.0 | 7.0 | 0.0 | 3.0 | 1.0 | 0.0 | 0.0 | 0.0 |
09 | 480.0 | 1.0 | 0.0 | 8.0 | 7.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 |
10 | 42.0 | 10.0 | 437.0 | 2.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 6.0 | 0.0 |
11 | 6.0 | 6.0 | 7.0 | 25.0 | 1.0 | 4.0 | 1.0 | 4.0 | 48.0 | 90.0 | 41.0 | 265.0 | 2.0 | 0.0 | 0.0 | 0.0 |
12 | 14.0 | 9.0 | 31.0 | 3.0 | 22.0 | 17.0 | 48.0 | 13.0 | 14.0 | 13.0 | 19.0 | 3.0 | 54.0 | 33.0 | 179.0 | 28.0 |
13 | 44.0 | 9.0 | 46.0 | 5.0 | 18.0 | 15.0 | 28.0 | 11.0 | 87.0 | 54.0 | 118.0 | 18.0 | 13.0 | 12.0 | 18.0 | 4.0 |
14 | 41.0 | 49.0 | 58.0 | 14.0 | 14.0 | 29.0 | 27.0 | 20.0 | 59.0 | 72.0 | 53.0 | 26.0 | 6.0 | 10.0 | 15.0 | 7.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.316 | -0.543 | -0.04 | -1.114 | 0.269 | -0.49 | -0.04 | 0.054 | 1.082 | -0.144 | 0.63 | -0.074 | -0.599 | -0.392 | -0.346 | -1.328 |
02 | 1.268 | -0.392 | 0.269 | -0.439 | -0.181 | -1.114 | -0.49 | -0.04 | 0.868 | -0.721 | 0.112 | -0.658 | -0.658 | -0.788 | -0.439 | -0.04 |
03 | 0.881 | 0.993 | 0.523 | -0.721 | -0.788 | -0.302 | -0.599 | -1.6 | 0.219 | -0.346 | 0.542 | -4.4 | -1.114 | 0.112 | 0.083 | -0.599 |
04 | -1.114 | 0.868 | 0.425 | -1.6 | -1.022 | 1.468 | -0.788 | -2.234 | -0.86 | 0.957 | 0.679 | -3.126 | -2.234 | -0.49 | -0.721 | -3.126 |
05 | -1.215 | -0.144 | -4.4 | -3.126 | 0.679 | 2.065 | -3.126 | -3.126 | -0.302 | 1.268 | -3.126 | -2.234 | -1.454 | -2.584 | -4.4 | -2.584 |
06 | -3.126 | -4.4 | 1.155 | -4.4 | -4.4 | -3.126 | 2.508 | -3.126 | -3.126 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -1.454 | -4.4 |
07 | -4.4 | -4.4 | -2.584 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -2.584 | -2.584 | 2.743 | -3.126 | -4.4 | -4.4 | -3.126 | -4.4 |
08 | -2.584 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -3.126 | -4.4 | 2.731 | -1.454 | -4.4 | -2.234 | -3.126 | -4.4 | -4.4 | -4.4 |
09 | 2.72 | -3.126 | -4.4 | -1.328 | -1.454 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -2.234 | -4.4 | -4.4 | -4.4 |
10 | 0.293 | -1.114 | 2.626 | -2.584 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -1.6 | -4.4 |
11 | -1.6 | -1.6 | -1.454 | -0.22 | -3.126 | -1.975 | -3.126 | -1.975 | 0.425 | 1.05 | 0.269 | 2.127 | -2.584 | -4.4 | -4.4 | -4.4 |
12 | -0.788 | -1.215 | -0.008 | -2.234 | -0.346 | -0.599 | 0.425 | -0.86 | -0.788 | -0.86 | -0.49 | -2.234 | 0.542 | 0.054 | 1.735 | -0.108 |
13 | 0.339 | -1.215 | 0.383 | -1.77 | -0.543 | -0.721 | -0.108 | -1.022 | 1.016 | 0.542 | 1.32 | -0.543 | -0.86 | -0.938 | -0.543 | -1.975 |
14 | 0.269 | 0.445 | 0.613 | -0.788 | -0.788 | -0.074 | -0.144 | -0.439 | 0.63 | 0.828 | 0.523 | -0.181 | -1.6 | -1.114 | -0.721 | -1.454 |