Model info
| Transcription factor | ELF2 (GeneCards) | ||||||||
| Model | ELF2_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vdvSCGGAAGhvv | ||||||||
| Best auROC (human) | 0.893 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elf-1-like factors {3.5.2.3} | ||||||||
| HGNC | HGNC:3317 | ||||||||
| EntrezGene | GeneID:1998 (SSTAR profile) | ||||||||
| UniProt ID | ELF2_HUMAN | ||||||||
| UniProt AC | Q15723 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ELF2 expression | ||||||||
| ReMap ChIP-seq dataset list | ELF2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 196.0 | 76.0 | 159.0 | 69.0 |
| 02 | 245.0 | 51.0 | 109.0 | 95.0 |
| 03 | 156.0 | 159.0 | 149.0 | 36.0 |
| 04 | 36.0 | 308.0 | 146.0 | 10.0 |
| 05 | 116.0 | 370.0 | 7.0 | 7.0 |
| 06 | 4.0 | 0.0 | 493.0 | 3.0 |
| 07 | 6.0 | 4.0 | 489.0 | 1.0 |
| 08 | 487.0 | 5.0 | 4.0 | 4.0 |
| 09 | 490.0 | 1.0 | 4.0 | 5.0 |
| 10 | 43.0 | 7.0 | 445.0 | 5.0 |
| 11 | 65.0 | 104.0 | 52.0 | 279.0 |
| 12 | 98.0 | 71.0 | 276.0 | 55.0 |
| 13 | 157.0 | 96.0 | 217.0 | 30.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.445 | -0.49 | 0.238 | -0.584 |
| 02 | 0.667 | -0.879 | -0.135 | -0.271 |
| 03 | 0.219 | 0.238 | 0.174 | -1.215 |
| 04 | -1.215 | 0.894 | 0.154 | -2.394 |
| 05 | -0.074 | 1.077 | -2.694 | -2.694 |
| 06 | -3.126 | -4.4 | 1.363 | -3.325 |
| 07 | -2.819 | -3.126 | 1.355 | -3.903 |
| 08 | 1.351 | -2.961 | -3.126 | -3.126 |
| 09 | 1.357 | -3.903 | -3.126 | -2.961 |
| 10 | -1.044 | -2.694 | 1.261 | -2.961 |
| 11 | -0.643 | -0.181 | -0.86 | 0.796 |
| 12 | -0.24 | -0.556 | 0.785 | -0.805 |
| 13 | 0.225 | -0.26 | 0.546 | -1.389 |