We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorELF2
(GeneCards)
ModelELF2_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusvdvSCGGAAGhvv
Best auROC (human)0.893
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyElf-1-like factors {3.5.2.3}
HGNCHGNC:3317
EntrezGeneGeneID:1998
(SSTAR profile)
UniProt IDELF2_HUMAN
UniProt ACQ15723
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7992099999999995
0.0005 4.7671600000000005
0.0001 6.785965
GTEx tissue expression atlas ELF2 expression
ReMap ChIP-seq dataset list ELF2 datasets
Motifs in JASPAR
PCM
ACGT
01196.076.0159.069.0
02245.051.0109.095.0
03156.0159.0149.036.0
0436.0308.0146.010.0
05116.0370.07.07.0
064.00.0493.03.0
076.04.0489.01.0
08487.05.04.04.0
09490.01.04.05.0
1043.07.0445.05.0
1165.0104.052.0279.0
1298.071.0276.055.0
13157.096.0217.030.0
PWM
ACGT
010.445-0.490.238-0.584
020.667-0.879-0.135-0.271
030.2190.2380.174-1.215
04-1.2150.8940.154-2.394
05-0.0741.077-2.694-2.694
06-3.126-4.41.363-3.325
07-2.819-3.1261.355-3.903
081.351-2.961-3.126-3.126
091.357-3.903-3.126-2.961
10-1.044-2.6941.261-2.961
11-0.643-0.181-0.860.796
12-0.24-0.5560.785-0.805
130.225-0.260.546-1.389