Model info
| Transcription factor | ELF3 (GeneCards) | ||||||||
| Model | ELF3_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vdAbSAGGAARYdv | ||||||||
| Best auROC (human) | 0.979 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 11 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | EHF-like factors {3.5.2.4} | ||||||||
| HGNC | HGNC:3318 | ||||||||
| EntrezGene | GeneID:1999 (SSTAR profile) | ||||||||
| UniProt ID | ELF3_HUMAN | ||||||||
| UniProt AC | P78545 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ELF3 expression | ||||||||
| ReMap ChIP-seq dataset list | ELF3 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 149.0 | 85.0 | 195.0 | 71.0 |
| 02 | 224.0 | 76.0 | 94.0 | 106.0 |
| 03 | 435.0 | 3.0 | 14.0 | 48.0 |
| 04 | 73.0 | 206.0 | 117.0 | 104.0 |
| 05 | 136.0 | 193.0 | 171.0 | 0.0 |
| 06 | 458.0 | 32.0 | 8.0 | 2.0 |
| 07 | 1.0 | 0.0 | 492.0 | 7.0 |
| 08 | 0.0 | 3.0 | 496.0 | 1.0 |
| 09 | 495.0 | 0.0 | 5.0 | 0.0 |
| 10 | 489.0 | 0.0 | 5.0 | 6.0 |
| 11 | 149.0 | 9.0 | 341.0 | 1.0 |
| 12 | 20.0 | 74.0 | 26.0 | 380.0 |
| 13 | 176.0 | 32.0 | 199.0 | 93.0 |
| 14 | 129.0 | 102.0 | 213.0 | 56.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.174 | -0.38 | 0.44 | -0.556 |
| 02 | 0.578 | -0.49 | -0.281 | -0.163 |
| 03 | 1.238 | -3.325 | -2.096 | -0.938 |
| 04 | -0.529 | 0.495 | -0.065 | -0.181 |
| 05 | 0.083 | 0.43 | 0.31 | -4.4 |
| 06 | 1.29 | -1.328 | -2.584 | -3.573 |
| 07 | -3.903 | -4.4 | 1.361 | -2.694 |
| 08 | -4.4 | -3.325 | 1.369 | -3.903 |
| 09 | 1.367 | -4.4 | -2.961 | -4.4 |
| 10 | 1.355 | -4.4 | -2.961 | -2.819 |
| 11 | 0.174 | -2.484 | 0.996 | -3.903 |
| 12 | -1.77 | -0.516 | -1.525 | 1.104 |
| 13 | 0.339 | -1.328 | 0.46 | -0.291 |
| 14 | 0.031 | -0.201 | 0.528 | -0.788 |