Model info
| Transcription factor | ELF5 (GeneCards) | ||||||||
| Model | ELF5_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvAbSMGGAAGhdv | ||||||||
| Best auROC (human) | 0.985 | ||||||||
| Best auROC (mouse) | 0.93 | ||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | 12 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | EHF-like factors {3.5.2.4} | ||||||||
| HGNC | HGNC:3320 | ||||||||
| EntrezGene | GeneID:2001 (SSTAR profile) | ||||||||
| UniProt ID | ELF5_HUMAN | ||||||||
| UniProt AC | Q9UKW6 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ELF5 expression | ||||||||
| ReMap ChIP-seq dataset list | ELF5 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 127.0 | 111.0 | 203.0 | 59.0 |
| 02 | 108.0 | 101.0 | 246.0 | 45.0 |
| 03 | 234.0 | 84.0 | 132.0 | 50.0 |
| 04 | 400.0 | 11.0 | 37.0 | 52.0 |
| 05 | 72.0 | 154.0 | 185.0 | 89.0 |
| 06 | 92.0 | 183.0 | 222.0 | 3.0 |
| 07 | 342.0 | 129.0 | 25.0 | 4.0 |
| 08 | 0.0 | 0.0 | 500.0 | 0.0 |
| 09 | 3.0 | 1.0 | 496.0 | 0.0 |
| 10 | 496.0 | 0.0 | 3.0 | 1.0 |
| 11 | 491.0 | 3.0 | 3.0 | 3.0 |
| 12 | 75.0 | 9.0 | 414.0 | 2.0 |
| 13 | 79.0 | 77.0 | 62.0 | 282.0 |
| 14 | 129.0 | 60.0 | 238.0 | 73.0 |
| 15 | 140.0 | 110.0 | 198.0 | 52.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.016 | -0.117 | 0.48 | -0.737 |
| 02 | -0.144 | -0.21 | 0.671 | -1.0 |
| 03 | 0.621 | -0.392 | 0.054 | -0.898 |
| 04 | 1.155 | -2.311 | -1.189 | -0.86 |
| 05 | -0.543 | 0.206 | 0.388 | -0.335 |
| 06 | -0.302 | 0.377 | 0.569 | -3.325 |
| 07 | 0.999 | 0.031 | -1.561 | -3.126 |
| 08 | -4.4 | -4.4 | 1.377 | -4.4 |
| 09 | -3.325 | -3.903 | 1.369 | -4.4 |
| 10 | 1.369 | -4.4 | -3.325 | -3.903 |
| 11 | 1.359 | -3.325 | -3.325 | -3.325 |
| 12 | -0.503 | -2.484 | 1.189 | -3.573 |
| 13 | -0.452 | -0.477 | -0.689 | 0.807 |
| 14 | 0.031 | -0.721 | 0.638 | -0.529 |
| 15 | 0.112 | -0.126 | 0.455 | -0.86 |