ELF5_HUMAN.H11MO.0.A motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

ELF5
(GeneCards)

Model

ELF5_HUMAN.H11MO.0.A

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv11

Model length

15

Quality

A

Motif rank

0

Consensus

vvvAbSMGGAAGhdv

Best auROC (human)

0.985

Best auROC (mouse)

0.93

Peak sets in benchmark (human)

3

Peak sets in benchmark (mouse)

12

Aligned words

500

TF family

Ets-related factors {3.5.2}

TF subfamily

EHF-like factors {3.5.2.4}

HGNC

EntrezGene

GeneID:2001
(SSTAR profile)

UniProt ID

UniProt AC

Q9UKW6
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	4.14611
0.0005	5.32071
0.0001	7.6520600000000005

GTEx tissue expression atlas

ELF5 expression

ReMap ChIP-seq dataset list

Motifs in JASPAR

MA0136.1 (ELF5; Mus musculus)

MA0136.2 (ELF5; Homo sapiens)

PCM

	A	C	G	T
01	127.0	111.0	203.0	59.0
02	108.0	101.0	246.0	45.0
03	234.0	84.0	132.0	50.0
04	400.0	11.0	37.0	52.0
05	72.0	154.0	185.0	89.0
06	92.0	183.0	222.0	3.0
07	342.0	129.0	25.0	4.0
08	0.0	0.0	500.0	0.0
09	3.0	1.0	496.0	0.0
10	496.0	0.0	3.0	1.0
11	491.0	3.0	3.0	3.0
12	75.0	9.0	414.0	2.0
13	79.0	77.0	62.0	282.0
14	129.0	60.0	238.0	73.0
15	140.0	110.0	198.0	52.0

PWM

	A	C	G	T
01	0.016	-0.117	0.48	-0.737
02	-0.144	-0.21	0.671	-1.0
03	0.621	-0.392	0.054	-0.898
04	1.155	-2.311	-1.189	-0.86
05	-0.543	0.206	0.388	-0.335
06	-0.302	0.377	0.569	-3.325
07	0.999	0.031	-1.561	-3.126
08	-4.4	-4.4	1.377	-4.4
09	-3.325	-3.903	1.369	-4.4
10	1.369	-4.4	-3.325	-3.903
11	1.359	-3.325	-3.325	-3.325
12	-0.503	-2.484	1.189	-3.573
13	-0.452	-0.477	-0.689	0.807
14	0.031	-0.721	0.638	-0.529
15	0.112	-0.126	0.455	-0.86