Model info
| Transcription factor | Elf5 | ||||||||
| Model | ELF5_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 17 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RRRARRAGGAARddvnd | ||||||||
| Best auROC (human) | 0.845 | ||||||||
| Best auROC (mouse) | 0.991 | ||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | 12 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | EHF-like factors {3.5.2.4} | ||||||||
| MGI | MGI:1335079 | ||||||||
| EntrezGene | GeneID:13711 (SSTAR profile) | ||||||||
| UniProt ID | ELF5_MOUSE | ||||||||
| UniProt AC | Q8VDK3 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Elf5 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 157.0 | 33.0 | 273.0 | 37.0 |
| 02 | 94.0 | 31.0 | 365.0 | 10.0 |
| 03 | 306.0 | 36.0 | 144.0 | 14.0 |
| 04 | 453.0 | 1.0 | 27.0 | 19.0 |
| 05 | 98.0 | 93.0 | 286.0 | 23.0 |
| 06 | 224.0 | 71.0 | 198.0 | 7.0 |
| 07 | 439.0 | 7.0 | 51.0 | 3.0 |
| 08 | 0.0 | 3.0 | 489.0 | 8.0 |
| 09 | 6.0 | 1.0 | 493.0 | 0.0 |
| 10 | 496.0 | 3.0 | 0.0 | 1.0 |
| 11 | 493.0 | 2.0 | 2.0 | 3.0 |
| 12 | 103.0 | 22.0 | 369.0 | 6.0 |
| 13 | 223.0 | 48.0 | 109.0 | 120.0 |
| 14 | 221.0 | 45.0 | 174.0 | 60.0 |
| 15 | 138.0 | 67.0 | 251.0 | 44.0 |
| 16 | 208.0 | 64.0 | 164.0 | 64.0 |
| 17 | 207.0 | 67.0 | 154.0 | 72.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.225 | -1.298 | 0.774 | -1.189 |
| 02 | -0.281 | -1.358 | 1.063 | -2.394 |
| 03 | 0.888 | -1.215 | 0.14 | -2.096 |
| 04 | 1.279 | -3.903 | -1.489 | -1.818 |
| 05 | -0.24 | -0.291 | 0.821 | -1.64 |
| 06 | 0.578 | -0.556 | 0.455 | -2.694 |
| 07 | 1.247 | -2.694 | -0.879 | -3.325 |
| 08 | -4.4 | -3.325 | 1.355 | -2.584 |
| 09 | -2.819 | -3.903 | 1.363 | -4.4 |
| 10 | 1.369 | -3.325 | -4.4 | -3.903 |
| 11 | 1.363 | -3.573 | -3.573 | -3.325 |
| 12 | -0.191 | -1.681 | 1.074 | -2.819 |
| 13 | 0.573 | -0.938 | -0.135 | -0.04 |
| 14 | 0.565 | -1.0 | 0.327 | -0.721 |
| 15 | 0.098 | -0.613 | 0.691 | -1.022 |
| 16 | 0.504 | -0.658 | 0.269 | -0.658 |
| 17 | 0.5 | -0.613 | 0.206 | -0.543 |