We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorElf5
ModelELF5_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusRRRARRAGGAARddvnd
Best auROC (human)0.845
Best auROC (mouse)0.991
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)12
Aligned words501
TF familyEts-related factors {3.5.2}
TF subfamilyEHF-like factors {3.5.2.4}
MGIMGI:1335079
EntrezGeneGeneID:13711
(SSTAR profile)
UniProt IDELF5_MOUSE
UniProt ACQ8VDK3
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.0747599999999995
0.0005 5.318859999999999
0.0001 7.86866
GTEx tissue expression atlas Elf5 expression
Motifs in JASPAR
MA0136.1 (ELF5; Mus musculus)
MA0136.2 (ELF5; Homo sapiens)
PCM
ACGT
01157.033.0273.037.0
0294.031.0365.010.0
03306.036.0144.014.0
04453.01.027.019.0
0598.093.0286.023.0
06224.071.0198.07.0
07439.07.051.03.0
080.03.0489.08.0
096.01.0493.00.0
10496.03.00.01.0
11493.02.02.03.0
12103.022.0369.06.0
13223.048.0109.0120.0
14221.045.0174.060.0
15138.067.0251.044.0
16208.064.0164.064.0
17207.067.0154.072.0
PWM
ACGT
010.225-1.2980.774-1.189
02-0.281-1.3581.063-2.394
030.888-1.2150.14-2.096
041.279-3.903-1.489-1.818
05-0.24-0.2910.821-1.64
060.578-0.5560.455-2.694
071.247-2.694-0.879-3.325
08-4.4-3.3251.355-2.584
09-2.819-3.9031.363-4.4
101.369-3.325-4.4-3.903
111.363-3.573-3.573-3.325
12-0.191-1.6811.074-2.819
130.573-0.938-0.135-0.04
140.565-1.00.327-0.721
150.098-0.6130.691-1.022
160.504-0.6580.269-0.658
170.5-0.6130.206-0.543