We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorELK1
(GeneCards)
ModelELK1_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
B
Motif rank
0
ConsensusnvSCGGAAGYvv
Best auROC (human)0.985
Best auROC (mouse)0.706
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)7
Aligned words511
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
HGNCHGNC:3321
EntrezGeneGeneID:2002
(SSTAR profile)
UniProt IDELK1_HUMAN
UniProt ACP19419
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.43732
0.0005 8.775535
0.0001 13.010545
GTEx tissue expression atlas ELK1 expression
ReMap ChIP-seq dataset list ELK1 datasets
Motifs in JASPAR
MA0028.1 (ELK1; Homo sapiens)
MA0028.2 (ELK1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0179.017.023.06.048.018.047.013.099.019.051.010.023.022.07.018.0
0245.0154.048.02.04.071.01.00.04.093.029.02.01.044.02.00.0
0315.026.00.013.041.0317.02.02.017.061.00.02.02.02.00.00.0
040.00.075.00.00.00.0406.00.00.00.01.01.00.00.017.00.0
050.00.00.00.00.00.00.00.00.00.0498.01.00.00.01.00.0
060.00.00.00.00.00.00.00.0496.01.00.02.01.00.00.00.0
07491.00.01.05.01.00.00.00.00.00.00.00.01.00.00.01.0
0846.020.0399.028.00.00.00.00.00.00.01.00.02.00.04.00.0
091.08.00.039.01.04.00.015.019.064.011.0310.00.012.00.016.0
107.01.012.01.017.010.052.09.06.01.01.03.050.055.0225.050.0
1126.016.032.06.011.029.016.011.092.066.0106.026.014.012.028.09.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.92-0.599-0.302-1.60.425-0.5430.404-0.861.145-0.490.485-1.114-0.302-0.346-1.454-0.543
020.3611.5850.425-2.584-1.9750.814-3.126-4.4-1.9751.082-0.074-2.584-3.1260.339-2.584-4.4
03-0.721-0.181-4.4-0.860.2692.306-2.584-2.584-0.5990.663-4.4-2.584-2.584-2.584-4.4-4.4
04-4.4-4.40.868-4.4-4.4-4.42.553-4.4-4.4-4.4-3.126-3.126-4.4-4.4-0.599-4.4
05-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.757-3.126-4.4-4.4-3.126-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.753-3.126-4.4-2.584-3.126-4.4-4.4-4.4
072.743-4.4-3.126-1.77-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-3.126
080.383-0.4392.536-0.108-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-2.584-4.4-1.975-4.4
09-3.126-1.328-4.40.219-3.126-1.975-4.4-0.721-0.490.711-1.0222.283-4.4-0.938-4.4-0.658
10-1.454-3.126-0.938-3.126-0.599-1.1140.504-1.215-1.6-3.126-3.126-2.2340.4650.561.9630.465
11-0.181-0.6580.023-1.6-1.022-0.074-0.658-1.0221.0720.7411.213-0.181-0.788-0.938-0.108-1.215