Model info
| Transcription factor | ELK1 (GeneCards) | ||||||||
| Model | ELK1_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vCCGGAAGTKv | ||||||||
| Best auROC (human) | 0.98 | ||||||||
| Best auROC (mouse) | 0.683 | ||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | 7 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elk-like factors {3.5.2.2} | ||||||||
| HGNC | HGNC:3321 | ||||||||
| EntrezGene | GeneID:2002 (SSTAR profile) | ||||||||
| UniProt ID | ELK1_HUMAN | ||||||||
| UniProt AC | P19419 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ELK1 expression | ||||||||
| ReMap ChIP-seq dataset list | ELK1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 252.0 | 65.0 | 131.0 | 52.0 |
| 02 | 60.0 | 392.0 | 45.0 | 3.0 |
| 03 | 62.0 | 420.0 | 1.0 | 17.0 |
| 04 | 4.0 | 2.0 | 493.0 | 1.0 |
| 05 | 3.0 | 1.0 | 496.0 | 0.0 |
| 06 | 499.0 | 1.0 | 0.0 | 0.0 |
| 07 | 493.0 | 0.0 | 2.0 | 5.0 |
| 08 | 40.0 | 15.0 | 413.0 | 32.0 |
| 09 | 14.0 | 84.0 | 14.0 | 388.0 |
| 10 | 58.0 | 55.0 | 322.0 | 65.0 |
| 11 | 159.0 | 127.0 | 181.0 | 33.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.695 | -0.643 | 0.046 | -0.86 |
| 02 | -0.721 | 1.135 | -1.0 | -3.325 |
| 03 | -0.689 | 1.203 | -3.903 | -1.92 |
| 04 | -3.126 | -3.573 | 1.363 | -3.903 |
| 05 | -3.325 | -3.903 | 1.369 | -4.4 |
| 06 | 1.375 | -3.903 | -4.4 | -4.4 |
| 07 | 1.363 | -4.4 | -3.573 | -2.961 |
| 08 | -1.114 | -2.034 | 1.187 | -1.328 |
| 09 | -2.096 | -0.392 | -2.096 | 1.124 |
| 10 | -0.754 | -0.805 | 0.939 | -0.643 |
| 11 | 0.238 | 0.016 | 0.366 | -1.298 |