We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorElk1
ModelELK1_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
B
Motif rank
0
ConsensusnvSCGGAAGYvv
Best auROC (human)0.985
Best auROC (mouse)0.706
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)7
Aligned words511
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
MGIMGI:101833
EntrezGeneGeneID:13712
(SSTAR profile)
UniProt IDELK1_MOUSE
UniProt ACP41969
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.40378
0.0005 8.737845
0.0001 12.997309999999999
GTEx tissue expression atlas Elk1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0179.017.023.06.048.018.047.013.099.019.051.010.023.022.07.018.0
0245.0154.048.02.04.071.01.00.04.093.029.02.01.044.02.00.0
0315.026.00.013.041.0317.02.02.017.061.00.02.02.02.00.00.0
040.00.075.00.00.00.0406.00.00.00.01.01.00.00.017.00.0
050.00.00.00.00.00.00.00.00.00.0498.01.00.00.01.00.0
060.00.00.00.00.00.00.00.0496.01.00.02.01.00.00.00.0
07491.00.01.05.01.00.00.00.00.00.00.00.01.00.00.01.0
0846.020.0399.028.00.00.00.00.00.00.01.00.02.00.04.00.0
091.08.00.039.01.04.00.015.019.064.011.0310.00.012.00.016.0
107.01.012.01.017.010.052.09.06.01.01.03.050.055.0225.050.0
1126.016.032.06.011.029.016.011.092.066.0106.026.014.012.028.09.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.92-0.599-0.302-1.60.425-0.5430.404-0.861.145-0.490.485-1.114-0.302-0.346-1.454-0.543
020.3611.5850.425-2.584-1.9750.814-3.126-4.4-1.9751.082-0.074-2.584-3.1260.339-2.584-4.4
03-0.721-0.181-4.4-0.860.2692.306-2.584-2.584-0.5990.663-4.4-2.584-2.584-2.584-4.4-4.4
04-4.4-4.40.868-4.4-4.4-4.42.553-4.4-4.4-4.4-3.126-3.126-4.4-4.4-0.599-4.4
05-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.757-3.126-4.4-4.4-3.126-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.753-3.126-4.4-2.584-3.126-4.4-4.4-4.4
072.743-4.4-3.126-1.77-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-3.126
080.383-0.4392.536-0.108-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-2.584-4.4-1.975-4.4
09-3.126-1.328-4.40.219-3.126-1.975-4.4-0.721-0.490.711-1.0222.283-4.4-0.938-4.4-0.658
10-1.454-3.126-0.938-3.126-0.599-1.1140.504-1.215-1.6-3.126-3.126-2.2340.4650.561.9630.465
11-0.181-0.6580.023-1.6-1.022-0.074-0.658-1.0221.0720.7411.213-0.181-0.788-0.938-0.108-1.215