We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorELK3
(GeneCards)
ModelELK3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
D
Motif rank
0
ConsensusvnCMGGAWGTGC
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
HGNCHGNC:3325
EntrezGeneGeneID:2004
(SSTAR profile)
UniProt IDELK3_HUMAN
UniProt ACP41970
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.7214100000000006
0.0005 5.4265799999999995
0.0001 6.91169
GTEx tissue expression atlas ELK3 expression
ReMap ChIP-seq dataset list ELK3 datasets
Motifs in JASPAR
PCM
ACGT
012.2452.7741.5850.396
022.5093.170.660.66
030.666.340.00.0
042.9062.3770.01.717
050.00.07.00.0
060.00.07.00.0
077.00.00.00.0
085.0190.660.01.321
092.7740.04.2260.0
100.01.1890.05.811
110.03.173.830.0
120.1655.4481.2220.165
PWM
ACGT
010.20.377-0.077-0.93
020.2920.492-0.668-0.668
03-0.6681.116-1.525-1.525
040.4170.247-1.525-0.015
05-1.525-1.5251.208-1.525
06-1.525-1.5251.208-1.525
071.208-1.525-1.525-1.525
080.901-0.668-1.525-0.213
090.377-1.5250.745-1.525
10-1.525-0.289-1.5251.035
11-1.5250.4920.658-1.525
12-1.2330.976-0.269-1.233