Model info
| Transcription factor | ELK4 (GeneCards) | ||||||||
| Model | ELK4_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvCCGGAARYRv | ||||||||
| Best auROC (human) | 0.966 | ||||||||
| Best auROC (mouse) | 0.638 | ||||||||
| Peak sets in benchmark (human) | 13 | ||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elk-like factors {3.5.2.2} | ||||||||
| HGNC | HGNC:3326 | ||||||||
| EntrezGene | GeneID:2005 (SSTAR profile) | ||||||||
| UniProt ID | ELK4_HUMAN | ||||||||
| UniProt AC | P28324 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ELK4 expression | ||||||||
| ReMap ChIP-seq dataset list | ELK4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 101.0 | 130.0 | 219.0 | 50.0 |
| 02 | 184.0 | 101.0 | 179.0 | 36.0 |
| 03 | 29.0 | 412.0 | 54.0 | 5.0 |
| 04 | 24.0 | 449.0 | 0.0 | 27.0 |
| 05 | 1.0 | 0.0 | 497.0 | 2.0 |
| 06 | 0.0 | 0.0 | 499.0 | 1.0 |
| 07 | 498.0 | 0.0 | 0.0 | 2.0 |
| 08 | 483.0 | 0.0 | 0.0 | 17.0 |
| 09 | 97.0 | 18.0 | 364.0 | 21.0 |
| 10 | 26.0 | 130.0 | 24.0 | 320.0 |
| 11 | 93.0 | 53.0 | 303.0 | 51.0 |
| 12 | 119.0 | 122.0 | 220.0 | 39.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.21 | 0.039 | 0.555 | -0.898 |
| 02 | 0.383 | -0.21 | 0.355 | -1.215 |
| 03 | -1.421 | 1.184 | -0.823 | -2.961 |
| 04 | -1.6 | 1.27 | -4.4 | -1.489 |
| 05 | -3.903 | -4.4 | 1.371 | -3.573 |
| 06 | -4.4 | -4.4 | 1.375 | -3.903 |
| 07 | 1.373 | -4.4 | -4.4 | -3.573 |
| 08 | 1.343 | -4.4 | -4.4 | -1.92 |
| 09 | -0.25 | -1.868 | 1.061 | -1.725 |
| 10 | -1.525 | 0.039 | -1.6 | 0.932 |
| 11 | -0.291 | -0.841 | 0.878 | -0.879 |
| 12 | -0.049 | -0.024 | 0.56 | -1.138 |