We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorELK4
(GeneCards)
ModelELK4_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusvvCCGGAARYRv
Best auROC (human)0.966
Best auROC (mouse)0.638
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)4
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
HGNCHGNC:3326
EntrezGeneGeneID:2005
(SSTAR profile)
UniProt IDELK4_HUMAN
UniProt ACP28324
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.05632
0.0005 4.079115
0.0001 6.101125
GTEx tissue expression atlas ELK4 expression
ReMap ChIP-seq dataset list ELK4 datasets
Motifs in JASPAR
MA0076.1 (ELK4; Homo sapiens)
MA0076.2 (ELK4; Homo sapiens)
PCM
ACGT
01101.0130.0219.050.0
02184.0101.0179.036.0
0329.0412.054.05.0
0424.0449.00.027.0
051.00.0497.02.0
060.00.0499.01.0
07498.00.00.02.0
08483.00.00.017.0
0997.018.0364.021.0
1026.0130.024.0320.0
1193.053.0303.051.0
12119.0122.0220.039.0
PWM
ACGT
01-0.210.0390.555-0.898
020.383-0.210.355-1.215
03-1.4211.184-0.823-2.961
04-1.61.27-4.4-1.489
05-3.903-4.41.371-3.573
06-4.4-4.41.375-3.903
071.373-4.4-4.4-3.573
081.343-4.4-4.4-1.92
09-0.25-1.8681.061-1.725
10-1.5250.039-1.60.932
11-0.291-0.8410.878-0.879
12-0.049-0.0240.56-1.138