We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorElk4
ModelELK4_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
B
Motif rank
0
ConsensusvvMCGGAARYvvvnnb
Best auROC (human)0.966
Best auROC (mouse)0.632
Peak sets in benchmark (human)13
Peak sets in benchmark (mouse)4
Aligned words190
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
MGIMGI:102853
EntrezGeneGeneID:13714
(SSTAR profile)
UniProt IDELK4_MOUSE
UniProt ACP41158
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.764360000000001
0.0005 8.58356
0.0001 12.125110000000001
GTEx tissue expression atlas Elk4 expression
Motifs in JASPAR
MA0076.1 (ELK4; Homo sapiens)
MA0076.2 (ELK4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0118.05.012.01.08.020.017.06.030.09.033.05.09.05.06.05.0
0213.042.08.02.01.036.02.00.05.051.07.05.00.017.00.00.0
039.07.00.03.015.0127.02.02.00.016.00.01.03.04.00.00.0
040.00.024.03.01.01.0149.03.00.00.02.00.00.00.06.00.0
050.00.01.00.00.00.01.00.00.01.0180.00.00.00.06.00.0
060.00.00.00.01.00.00.00.0184.00.04.00.00.00.00.00.0
07182.00.00.03.00.00.00.00.04.00.00.00.00.00.00.00.0
0842.03.0133.08.00.00.00.00.00.00.00.00.00.00.03.00.0
098.014.02.018.00.02.00.01.03.046.010.077.00.03.04.01.0
101.03.06.01.08.014.037.06.02.02.010.02.017.017.056.07.0
117.07.011.03.02.017.09.08.027.024.052.06.02.02.010.02.0
1210.011.016.01.07.018.012.013.013.025.038.06.01.09.08.01.0
1310.03.07.011.05.015.025.018.013.033.018.010.02.03.011.05.0
1416.00.012.02.09.015.019.011.012.022.013.014.09.04.010.021.0
1512.02.024.08.06.013.09.013.05.014.019.016.05.06.024.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.412-0.8240.015-2.213-0.3770.5150.356-0.6520.916-0.2641.01-0.824-0.264-0.824-0.652-0.824
020.0931.249-0.377-1.652-2.2131.096-1.652-3.612-0.8241.442-0.505-0.824-3.6120.356-3.612-3.612
03-0.264-0.505-3.612-1.2940.2332.35-1.652-1.652-3.6120.296-3.612-2.213-1.294-1.031-3.612-3.612
04-3.612-3.6120.695-1.294-2.213-2.2132.51-1.294-3.612-3.612-1.652-3.612-3.612-3.612-0.652-3.612
05-3.612-3.612-2.213-3.612-3.612-3.612-2.213-3.612-3.612-2.2132.698-3.612-3.612-3.612-0.652-3.612
06-3.612-3.612-3.612-3.612-2.213-3.612-3.612-3.6122.72-3.612-1.031-3.612-3.612-3.612-3.612-3.612
072.709-3.612-3.612-1.294-3.612-3.612-3.612-3.612-1.031-3.612-3.612-3.612-3.612-3.612-3.612-3.612
081.249-1.2942.396-0.377-3.612-3.612-3.612-3.612-3.612-3.612-3.612-3.612-3.612-3.612-1.294-3.612
09-0.3770.166-1.6520.412-3.612-1.652-3.612-2.213-1.2941.339-0.1621.852-3.612-1.294-1.031-2.213
10-2.213-1.294-0.652-2.213-0.3770.1661.123-0.652-1.652-1.652-0.162-1.6520.3560.3561.535-0.505
11-0.505-0.505-0.069-1.294-1.6520.356-0.264-0.3770.8110.6951.461-0.652-1.652-1.652-0.162-1.652
12-0.162-0.0690.296-2.213-0.5050.4120.0150.0930.0930.7351.15-0.652-2.213-0.264-0.377-2.213
13-0.162-1.294-0.505-0.069-0.8240.2330.7350.4120.0931.010.412-0.162-1.652-1.294-0.069-0.824
140.296-3.6120.015-1.652-0.2640.2330.465-0.0690.0150.6090.0930.166-0.264-1.031-0.1620.563
150.015-1.6520.695-0.377-0.6520.093-0.2640.093-0.8240.1660.4650.296-0.824-0.6520.6950.093