Model info
| Transcription factor | Elk4 | ||||||||
| Model | ELK4_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvSMGGAARbvv | ||||||||
| Best auROC (human) | 0.955 | ||||||||
| Best auROC (mouse) | 0.647 | ||||||||
| Peak sets in benchmark (human) | 13 | ||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 175 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elk-like factors {3.5.2.2} | ||||||||
| MGI | MGI:102853 | ||||||||
| EntrezGene | GeneID:13714 (SSTAR profile) | ||||||||
| UniProt ID | ELK4_MOUSE | ||||||||
| UniProt AC | P41158 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Elk4 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 36.0 | 45.0 | 76.0 | 18.0 |
| 02 | 60.0 | 29.0 | 77.0 | 9.0 |
| 03 | 76.0 | 17.0 | 76.0 | 6.0 |
| 04 | 31.0 | 98.0 | 39.0 | 7.0 |
| 05 | 44.0 | 114.0 | 8.0 | 9.0 |
| 06 | 3.0 | 0.0 | 171.0 | 1.0 |
| 07 | 6.0 | 1.0 | 167.0 | 1.0 |
| 08 | 165.0 | 6.0 | 4.0 | 0.0 |
| 09 | 170.0 | 0.0 | 3.0 | 2.0 |
| 10 | 40.0 | 4.0 | 124.0 | 7.0 |
| 11 | 16.0 | 72.0 | 19.0 | 68.0 |
| 12 | 52.0 | 20.0 | 92.0 | 11.0 |
| 13 | 32.0 | 36.0 | 80.0 | 27.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.189 | 0.027 | 0.54 | -0.848 |
| 02 | 0.308 | -0.397 | 0.553 | -1.476 |
| 03 | 0.54 | -0.901 | 0.54 | -1.821 |
| 04 | -0.333 | 0.79 | -0.111 | -1.692 |
| 05 | 0.006 | 0.94 | -1.579 | -1.476 |
| 06 | -2.351 | -3.552 | 1.342 | -2.979 |
| 07 | -1.821 | -2.979 | 1.318 | -2.979 |
| 08 | 1.306 | -1.821 | -2.142 | -3.552 |
| 09 | 1.336 | -3.552 | -2.351 | -2.616 |
| 10 | -0.087 | -2.142 | 1.023 | -1.692 |
| 11 | -0.957 | 0.487 | -0.797 | 0.431 |
| 12 | 0.168 | -0.749 | 0.728 | -1.299 |
| 13 | -0.302 | -0.189 | 0.59 | -0.465 |