We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEMX1
(GeneCards)
ModelEMX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensusTAATTARbbhWh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words31003
TF familyNK-related factors {3.1.2}
TF subfamilyEMX {3.1.2.6}
HGNCHGNC:3340
EntrezGeneGeneID:2016
(SSTAR profile)
UniProt IDEMX1_HUMAN
UniProt ACQ04741
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.976514999999999
0.0005 6.1914
0.0001 8.278334999999998
GTEx tissue expression atlas EMX1 expression
ReMap ChIP-seq dataset list EMX1 datasets
Motifs in JASPAR
PCM
ACGT
011036.04296.0863.024293.0
0225220.254817.25220.25230.25
0330169.0130.080.0109.0
0470.7558.7568.7530289.75
0538.055.0182.030213.0
0630282.045.0106.055.0
076944.54326.519030.5186.5
081441.012737.05567.010743.0
094323.254361.256394.2515409.25
1015949.254603.253079.256856.25
1118268.53746.52747.55725.5
128504.753374.752639.7515968.75
PWM
ACGT
01-1.994-0.573-2.1761.159
021.196-0.459-3.533-3.489
031.376-4.052-4.525-4.224
04-4.644-4.823-4.6721.38
05-5.236-4.886-3.7211.377
061.379-5.077-4.252-4.886
07-0.093-0.5660.915-3.697
08-1.6640.513-0.3140.343
09-0.567-0.558-0.1760.704
100.738-0.504-0.906-0.106
110.874-0.71-1.02-0.286
120.11-0.814-1.060.739