We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEOMES
(GeneCards)
ModelEOMES_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensusddvARGTGhbAR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words376
TF familyTBrain-related factors {6.5.2}
TF subfamilyTBR-2 (EOMES) {6.5.2.0.2}
HGNCHGNC:3372
EntrezGeneGeneID:8320
(SSTAR profile)
UniProt IDEOMES_HUMAN
UniProt ACO95936
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.273105
0.0005 6.12471
0.0001 7.853294999999999
GTEx tissue expression atlas EOMES expression
ReMap ChIP-seq dataset list EOMES datasets
Motifs in JASPAR
PCM
ACGT
01172.78640.018107.73254.464
0295.22119.083174.53986.157
0382.58470.822167.72353.871
04312.963.03425.90733.099
0599.6530.0254.44520.902
067.82331.493331.7313.954
078.8291.0355.802359.334
080.02.016372.0120.972
09136.46567.90710.051160.577
1019.8963.273128.634163.203
11336.9983.05712.05122.894
12246.34613.17798.57216.904
PWM
ACGT
010.604-0.8310.137-0.532
020.015-1.5330.614-0.083
03-0.125-0.2750.575-0.543
041.194-3.049-1.246-1.013
050.06-4.1630.989-1.448
06-2.326-1.0611.252-2.863
07-2.223-3.633-2.5711.332
08-4.163-3.3041.367-3.659
090.371-0.317-2.1110.532
10-1.494-0.3860.3120.548
111.268-3.044-1.951-1.363
120.956-1.8710.049-1.645