Check the newest release v13
Model info
Transcription factorEPAS1
(GeneCards)
ModelEPAS1_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
B
Motif rank
0
ConsensusvdCACGThbnhn
Best auROC (human)0.892
Best auROC (mouse)
Peak sets in benchmark (human)24
Peak sets in benchmark (mouse)
Aligned words503
TF familyPAS domain factors {1.2.5}
TF subfamilyAhr-like factors {1.2.5.1}
HGNCHGNC:3374
EntrezGeneGeneID:2034
(SSTAR profile)
UniProt IDEPAS1_HUMAN
UniProt ACQ99814
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.159369999999999
0.0005 7.901425
0.0001 11.374865
GTEx tissue expression atlas EPAS1 expression
ReMap ChIP-seq dataset list EPAS1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0112.07.061.020.027.015.017.033.018.08.070.0123.05.08.067.09.0
020.062.00.00.00.038.00.00.01.0214.00.00.00.0185.00.00.0
030.00.01.00.0497.01.01.00.00.00.00.00.00.00.00.00.0
040.0496.00.01.00.01.00.00.00.02.00.00.00.00.00.00.0
050.00.00.00.035.05.0456.03.00.00.00.00.01.00.00.00.0
060.05.01.030.00.02.00.03.04.048.015.0389.00.00.00.03.0
073.01.00.00.038.07.01.09.06.04.05.01.0223.0107.031.064.0
0822.0120.096.032.09.069.06.035.00.018.06.013.04.026.018.026.0
097.010.014.04.078.081.026.048.013.051.042.020.012.042.027.025.0
1016.062.022.010.059.061.012.052.020.068.014.07.014.052.015.016.0
1117.040.033.019.095.073.026.049.010.016.023.014.05.029.035.016.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.938-1.4540.663-0.439-0.144-0.721-0.5990.054-0.543-1.3280.81.361-1.77-1.3280.756-1.215
02-4.40.679-4.4-4.4-4.40.193-4.4-4.4-3.1261.913-4.4-4.4-4.41.768-4.4-4.4
03-4.4-4.4-3.126-4.42.755-3.126-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
04-4.42.753-4.4-3.126-4.4-3.126-4.4-4.4-4.4-2.584-4.4-4.4-4.4-4.4-4.4-4.4
05-4.4-4.4-4.4-4.40.112-1.772.669-2.234-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4
06-4.4-1.77-3.126-0.04-4.4-2.584-4.4-2.234-1.9750.425-0.7212.51-4.4-4.4-4.4-2.234
07-2.234-3.126-4.4-4.40.193-1.454-3.126-1.215-1.6-1.975-1.77-3.1261.9551.222-0.0080.711
08-0.3461.3361.1140.023-1.2150.785-1.60.112-4.4-0.543-1.6-0.86-1.975-0.181-0.543-0.181
09-1.454-1.114-0.788-1.9750.9070.945-0.1810.425-0.860.4850.293-0.439-0.9380.293-0.144-0.22
10-0.6580.679-0.346-1.1140.630.663-0.9380.504-0.4390.771-0.788-1.454-0.7880.504-0.721-0.658
11-0.5990.2440.054-0.491.1040.841-0.1810.445-1.114-0.658-0.302-0.788-1.77-0.0740.112-0.658