Transcription factor | Epas1 | ||||||||
Model | EPAS1_MOUSE.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 9 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | vdACGTGhh | ||||||||
Best auROC (human) | 0.838 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 24 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 500 | ||||||||
TF family | PAS domain factors {1.2.5} | ||||||||
TF subfamily | Ahr-like factors {1.2.5.1} | ||||||||
MGI | MGI:109169 | ||||||||
EntrezGene | GeneID:13819 (SSTAR profile) | ||||||||
UniProt ID | EPAS1_MOUSE | ||||||||
UniProt AC | P97481 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Epas1 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 115.0 | 128.0 | 223.0 | 34.0 |
02 | 83.0 | 35.0 | 122.0 | 260.0 |
03 | 433.0 | 10.0 | 54.0 | 3.0 |
04 | 10.0 | 456.0 | 13.0 | 21.0 |
05 | 8.0 | 5.0 | 485.0 | 2.0 |
06 | 0.0 | 0.0 | 1.0 | 499.0 |
07 | 0.0 | 0.0 | 499.0 | 1.0 |
08 | 187.0 | 235.0 | 30.0 | 48.0 |
09 | 80.0 | 245.0 | 67.0 | 108.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.082 | 0.023 | 0.573 | -1.27 |
02 | -0.403 | -1.242 | -0.024 | 0.726 |
03 | 1.234 | -2.394 | -0.823 | -3.325 |
04 | -2.394 | 1.285 | -2.163 | -1.725 |
05 | -2.584 | -2.961 | 1.347 | -3.573 |
06 | -4.4 | -4.4 | -3.903 | 1.375 |
07 | -4.4 | -4.4 | 1.375 | -3.903 |
08 | 0.399 | 0.626 | -1.389 | -0.938 |
09 | -0.439 | 0.667 | -0.613 | -0.144 |