We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorERG
(GeneCards)
ModelERG_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusvdvRSAGGAAGbvRv
Best auROC (human)0.986
Best auROC (mouse)0.901
Peak sets in benchmark (human)79
Peak sets in benchmark (mouse)16
Aligned words501
TF familyEts-related factors {3.5.2}
TF subfamilyEts-like factors {3.5.2.1}
HGNCHGNC:3446
EntrezGeneGeneID:2078
(SSTAR profile)
UniProt IDERG_HUMAN
UniProt ACP11308
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.6848600000000005
0.0005 10.30321
0.0001 15.398060000000001
GTEx tissue expression atlas ERG expression
ReMap ChIP-seq dataset list ERG datasets
Motifs in JASPAR
MA0474.1 (Erg; Mus musculus)
MA0474.2 (ERG; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0135.06.042.09.049.025.026.026.048.039.096.030.015.06.027.021.0
0253.020.062.012.021.019.019.017.074.034.074.09.09.011.049.017.0
0371.05.078.03.055.01.016.012.078.016.0104.06.016.01.034.04.0
0420.0130.067.03.02.019.02.00.023.0115.090.04.01.021.03.00.0
0539.07.00.00.0229.055.01.00.0135.025.02.00.04.02.01.00.0
063.00.0402.02.00.00.089.00.00.00.04.00.00.00.00.00.0
070.00.03.00.00.00.00.00.02.02.0491.00.01.00.01.00.0
083.00.00.00.02.00.00.00.0494.00.01.00.00.00.00.00.0
09471.01.02.025.00.00.00.00.01.00.00.00.00.00.00.00.0
10113.05.0352.02.00.00.01.00.00.00.02.00.00.00.025.00.0
119.037.09.058.01.01.00.03.035.098.081.0166.00.00.00.02.0
126.03.036.00.045.030.033.028.056.06.024.04.017.024.0165.023.0
1348.04.065.07.026.012.023.02.070.037.0136.015.08.01.045.01.0
1429.039.069.015.09.022.09.014.052.095.091.031.00.09.09.07.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.112-1.60.293-1.2150.445-0.22-0.181-0.1810.4250.2191.114-0.04-0.721-1.6-0.144-0.392
020.523-0.4390.679-0.938-0.392-0.49-0.49-0.5990.8550.0830.855-1.215-1.215-1.0220.445-0.599
030.814-1.770.907-2.2340.56-3.126-0.658-0.9380.907-0.6581.194-1.6-0.658-3.1260.083-1.975
04-0.4391.4160.756-2.234-2.584-0.49-2.584-4.4-0.3021.2941.05-1.975-3.126-0.392-2.234-4.4
050.219-1.454-4.4-4.41.9810.56-3.126-4.41.454-0.22-2.584-4.4-1.975-2.584-3.126-4.4
06-2.234-4.42.543-2.584-4.4-4.41.039-4.4-4.4-4.4-1.975-4.4-4.4-4.4-4.4-4.4
07-4.4-4.4-2.234-4.4-4.4-4.4-4.4-4.4-2.584-2.5842.743-4.4-3.126-4.4-3.126-4.4
08-2.234-4.4-4.4-4.4-2.584-4.4-4.4-4.42.749-4.4-3.126-4.4-4.4-4.4-4.4-4.4
092.701-3.126-2.584-0.22-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-4.4-4.4-4.4-4.4
101.276-1.772.41-2.584-4.4-4.4-3.126-4.4-4.4-4.4-2.584-4.4-4.4-4.4-0.22-4.4
11-1.2150.167-1.2150.613-3.126-3.126-4.4-2.2340.1121.1350.9451.66-4.4-4.4-4.4-2.584
12-1.6-2.2340.14-4.40.361-0.040.054-0.1080.578-1.6-0.26-1.975-0.599-0.261.654-0.302
130.425-1.9750.726-1.454-0.181-0.938-0.302-2.5840.80.1671.461-0.721-1.328-3.1260.361-3.126
14-0.0740.2190.785-0.721-1.215-0.346-1.215-0.7880.5041.1041.061-0.008-4.4-1.215-1.215-1.454