We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorERG
(GeneCards)
ModelERG_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusvvRSAGGAAGbvv
Best auROC (human)0.984
Best auROC (mouse)0.877
Peak sets in benchmark (human)79
Peak sets in benchmark (mouse)16
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyEts-like factors {3.5.2.1}
HGNCHGNC:3446
EntrezGeneGeneID:2078
(SSTAR profile)
UniProt IDERG_HUMAN
UniProt ACP11308
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.42146
0.0005 5.52416
0.0001 7.769625
GTEx tissue expression atlas ERG expression
ReMap ChIP-seq dataset list ERG datasets
Motifs in JASPAR
MA0474.1 (Erg; Mus musculus)
MA0474.2 (ERG; Homo sapiens)
PCM
ACGT
01169.076.0180.075.0
02154.078.0229.039.0
03218.026.0228.028.0
0451.0280.0167.02.0
05433.058.08.01.0
062.02.0493.03.0
073.02.0495.00.0
08488.05.05.02.0
09468.01.011.020.0
10102.08.0389.01.0
1151.0155.087.0207.0
12112.080.0257.051.0
13131.067.0270.032.0
PWM
ACGT
010.298-0.490.361-0.503
020.206-0.4640.6-1.138
030.551-1.5250.595-1.454
04-0.8790.80.287-3.573
051.234-0.754-2.584-3.903
06-3.573-3.5731.363-3.325
07-3.325-3.5731.367-4.4
081.353-2.961-2.961-3.573
091.311-3.903-2.311-1.77
10-0.201-2.5841.127-3.903
11-0.8790.213-0.3570.5
12-0.108-0.4390.714-0.879
130.046-0.6130.763-1.328