Model info
| Transcription factor | ERG (GeneCards) | ||||||||
| Model | ERG_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvRSAGGAAGbvv | ||||||||
| Best auROC (human) | 0.984 | ||||||||
| Best auROC (mouse) | 0.877 | ||||||||
| Peak sets in benchmark (human) | 79 | ||||||||
| Peak sets in benchmark (mouse) | 16 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| HGNC | HGNC:3446 | ||||||||
| EntrezGene | GeneID:2078 (SSTAR profile) | ||||||||
| UniProt ID | ERG_HUMAN | ||||||||
| UniProt AC | P11308 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ERG expression | ||||||||
| ReMap ChIP-seq dataset list | ERG datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 169.0 | 76.0 | 180.0 | 75.0 |
| 02 | 154.0 | 78.0 | 229.0 | 39.0 |
| 03 | 218.0 | 26.0 | 228.0 | 28.0 |
| 04 | 51.0 | 280.0 | 167.0 | 2.0 |
| 05 | 433.0 | 58.0 | 8.0 | 1.0 |
| 06 | 2.0 | 2.0 | 493.0 | 3.0 |
| 07 | 3.0 | 2.0 | 495.0 | 0.0 |
| 08 | 488.0 | 5.0 | 5.0 | 2.0 |
| 09 | 468.0 | 1.0 | 11.0 | 20.0 |
| 10 | 102.0 | 8.0 | 389.0 | 1.0 |
| 11 | 51.0 | 155.0 | 87.0 | 207.0 |
| 12 | 112.0 | 80.0 | 257.0 | 51.0 |
| 13 | 131.0 | 67.0 | 270.0 | 32.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.298 | -0.49 | 0.361 | -0.503 |
| 02 | 0.206 | -0.464 | 0.6 | -1.138 |
| 03 | 0.551 | -1.525 | 0.595 | -1.454 |
| 04 | -0.879 | 0.8 | 0.287 | -3.573 |
| 05 | 1.234 | -0.754 | -2.584 | -3.903 |
| 06 | -3.573 | -3.573 | 1.363 | -3.325 |
| 07 | -3.325 | -3.573 | 1.367 | -4.4 |
| 08 | 1.353 | -2.961 | -2.961 | -3.573 |
| 09 | 1.311 | -3.903 | -2.311 | -1.77 |
| 10 | -0.201 | -2.584 | 1.127 | -3.903 |
| 11 | -0.879 | 0.213 | -0.357 | 0.5 |
| 12 | -0.108 | -0.439 | 0.714 | -0.879 |
| 13 | 0.046 | -0.613 | 0.763 | -1.328 |