Transcription factor | ESRRA (GeneCards) | ||||||||
Model | ERR1_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nhbbbSAAGGTCAhn | ||||||||
Best auROC (human) | 0.962 | ||||||||
Best auROC (mouse) | 0.98 | ||||||||
Peak sets in benchmark (human) | 31 | ||||||||
Peak sets in benchmark (mouse) | 3 | ||||||||
Aligned words | 507 | ||||||||
TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
HGNC | HGNC:3471 | ||||||||
EntrezGene | GeneID:2101 (SSTAR profile) | ||||||||
UniProt ID | ERR1_HUMAN | ||||||||
UniProt AC | P11474 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ESRRA expression | ||||||||
ReMap ChIP-seq dataset list | ESRRA datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 34.0 | 23.0 | 42.0 | 26.0 | 38.0 | 21.0 | 3.0 | 56.0 | 25.0 | 27.0 | 22.0 | 23.0 | 17.0 | 26.0 | 12.0 | 104.0 |
02 | 21.0 | 23.0 | 51.0 | 19.0 | 31.0 | 25.0 | 7.0 | 34.0 | 15.0 | 15.0 | 41.0 | 8.0 | 19.0 | 42.0 | 104.0 | 44.0 |
03 | 13.0 | 26.0 | 32.0 | 15.0 | 17.0 | 52.0 | 3.0 | 33.0 | 17.0 | 106.0 | 46.0 | 34.0 | 8.0 | 42.0 | 24.0 | 31.0 |
04 | 3.0 | 18.0 | 18.0 | 16.0 | 15.0 | 107.0 | 1.0 | 103.0 | 10.0 | 29.0 | 16.0 | 50.0 | 5.0 | 38.0 | 16.0 | 54.0 |
05 | 0.0 | 23.0 | 9.0 | 1.0 | 8.0 | 171.0 | 5.0 | 8.0 | 11.0 | 20.0 | 17.0 | 3.0 | 9.0 | 149.0 | 60.0 | 5.0 |
06 | 21.0 | 0.0 | 7.0 | 0.0 | 352.0 | 2.0 | 5.0 | 4.0 | 82.0 | 3.0 | 6.0 | 0.0 | 10.0 | 0.0 | 7.0 | 0.0 |
07 | 461.0 | 1.0 | 3.0 | 0.0 | 4.0 | 0.0 | 1.0 | 0.0 | 25.0 | 0.0 | 0.0 | 0.0 | 3.0 | 1.0 | 0.0 | 0.0 |
08 | 10.0 | 0.0 | 482.0 | 1.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
09 | 0.0 | 0.0 | 9.0 | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 2.0 | 2.0 | 481.0 | 2.0 | 0.0 | 0.0 | 0.0 | 1.0 |
10 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 2.0 | 43.0 | 0.0 | 37.0 | 411.0 | 0.0 | 0.0 | 2.0 | 2.0 |
11 | 2.0 | 40.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 39.0 | 0.0 | 0.0 | 0.0 | 370.0 | 33.0 | 14.0 |
12 | 2.0 | 0.0 | 0.0 | 0.0 | 429.0 | 1.0 | 17.0 | 2.0 | 30.0 | 1.0 | 1.0 | 2.0 | 12.0 | 1.0 | 1.0 | 0.0 |
13 | 93.0 | 200.0 | 75.0 | 105.0 | 0.0 | 2.0 | 0.0 | 1.0 | 1.0 | 6.0 | 4.0 | 8.0 | 0.0 | 3.0 | 1.0 | 0.0 |
14 | 42.0 | 14.0 | 31.0 | 7.0 | 100.0 | 59.0 | 14.0 | 38.0 | 19.0 | 14.0 | 33.0 | 14.0 | 21.0 | 26.0 | 28.0 | 39.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.085 | -0.3 | 0.294 | -0.179 | 0.195 | -0.39 | -2.232 | 0.58 | -0.218 | -0.142 | -0.344 | -0.3 | -0.597 | -0.179 | -0.936 | 1.196 |
02 | -0.39 | -0.3 | 0.487 | -0.488 | -0.006 | -0.218 | -1.452 | 0.085 | -0.719 | -0.719 | 0.271 | -1.326 | -0.488 | 0.294 | 1.196 | 0.341 |
03 | -0.858 | -0.179 | 0.025 | -0.719 | -0.597 | 0.506 | -2.232 | 0.056 | -0.597 | 1.215 | 0.385 | 0.085 | -1.326 | 0.294 | -0.258 | -0.006 |
04 | -2.232 | -0.541 | -0.541 | -0.656 | -0.719 | 1.224 | -3.124 | 1.186 | -1.112 | -0.072 | -0.656 | 0.467 | -1.768 | 0.195 | -0.656 | 0.544 |
05 | -4.398 | -0.3 | -1.213 | -3.124 | -1.326 | 1.692 | -1.768 | -1.326 | -1.02 | -0.437 | -0.597 | -2.232 | -1.213 | 1.554 | 0.648 | -1.768 |
06 | -0.39 | -4.398 | -1.452 | -4.398 | 2.412 | -2.582 | -1.768 | -1.973 | 0.959 | -2.232 | -1.598 | -4.398 | -1.112 | -4.398 | -1.452 | -4.398 |
07 | 2.682 | -3.124 | -2.232 | -4.398 | -1.973 | -4.398 | -3.124 | -4.398 | -0.218 | -4.398 | -4.398 | -4.398 | -2.232 | -3.124 | -4.398 | -4.398 |
08 | -1.112 | -4.398 | 2.726 | -3.124 | -4.398 | -3.124 | -3.124 | -4.398 | -4.398 | -4.398 | -1.973 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 |
09 | -4.398 | -4.398 | -1.213 | -3.124 | -4.398 | -4.398 | -3.124 | -4.398 | -2.582 | -2.582 | 2.724 | -2.582 | -4.398 | -4.398 | -4.398 | -3.124 |
10 | -4.398 | -4.398 | -4.398 | -2.582 | -4.398 | -4.398 | -4.398 | -2.582 | 0.318 | -4.398 | 0.169 | 2.567 | -4.398 | -4.398 | -2.582 | -2.582 |
11 | -2.582 | 0.246 | -3.124 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | -4.398 | 0.221 | -4.398 | -4.398 | -4.398 | 2.462 | 0.056 | -0.786 |
12 | -2.582 | -4.398 | -4.398 | -4.398 | 2.61 | -3.124 | -0.597 | -2.582 | -0.038 | -3.124 | -3.124 | -2.582 | -0.936 | -3.124 | -3.124 | -4.398 |
13 | 1.084 | 1.848 | 0.87 | 1.205 | -4.398 | -2.582 | -4.398 | -3.124 | -3.124 | -1.598 | -1.973 | -1.326 | -4.398 | -2.232 | -3.124 | -4.398 |
14 | 0.294 | -0.786 | -0.006 | -1.452 | 1.157 | 0.632 | -0.786 | 0.195 | -0.488 | -0.786 | 0.056 | -0.786 | -0.39 | -0.179 | -0.106 | 0.221 |