We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorESRRA
(GeneCards)
ModelERR1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnhbbbSAAGGTCAhn
Best auROC (human)0.962
Best auROC (mouse)0.98
Peak sets in benchmark (human)31
Peak sets in benchmark (mouse)3
Aligned words507
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
HGNCHGNC:3471
EntrezGeneGeneID:2101
(SSTAR profile)
UniProt IDERR1_HUMAN
UniProt ACP11474
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.98371
0.0005 10.233810000000002
0.0001 15.13976
GTEx tissue expression atlas ESRRA expression
ReMap ChIP-seq dataset list ESRRA datasets
Motifs in JASPAR
MA0592.1 (ESRRA; Homo sapiens)
MA0592.2 (Esrra; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0134.023.042.026.038.021.03.056.025.027.022.023.017.026.012.0104.0
0221.023.051.019.031.025.07.034.015.015.041.08.019.042.0104.044.0
0313.026.032.015.017.052.03.033.017.0106.046.034.08.042.024.031.0
043.018.018.016.015.0107.01.0103.010.029.016.050.05.038.016.054.0
050.023.09.01.08.0171.05.08.011.020.017.03.09.0149.060.05.0
0621.00.07.00.0352.02.05.04.082.03.06.00.010.00.07.00.0
07461.01.03.00.04.00.01.00.025.00.00.00.03.01.00.00.0
0810.00.0482.01.00.01.01.00.00.00.04.00.00.00.00.00.0
090.00.09.01.00.00.01.00.02.02.0481.02.00.00.00.01.0
100.00.00.02.00.00.00.02.043.00.037.0411.00.00.02.02.0
112.040.01.00.00.00.00.00.00.039.00.00.00.0370.033.014.0
122.00.00.00.0429.01.017.02.030.01.01.02.012.01.01.00.0
1393.0200.075.0105.00.02.00.01.01.06.04.08.00.03.01.00.0
1442.014.031.07.0100.059.014.038.019.014.033.014.021.026.028.039.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.085-0.30.294-0.1790.195-0.39-2.2320.58-0.218-0.142-0.344-0.3-0.597-0.179-0.9361.196
02-0.39-0.30.487-0.488-0.006-0.218-1.4520.085-0.719-0.7190.271-1.326-0.4880.2941.1960.341
03-0.858-0.1790.025-0.719-0.5970.506-2.2320.056-0.5971.2150.3850.085-1.3260.294-0.258-0.006
04-2.232-0.541-0.541-0.656-0.7191.224-3.1241.186-1.112-0.072-0.6560.467-1.7680.195-0.6560.544
05-4.398-0.3-1.213-3.124-1.3261.692-1.768-1.326-1.02-0.437-0.597-2.232-1.2131.5540.648-1.768
06-0.39-4.398-1.452-4.3982.412-2.582-1.768-1.9730.959-2.232-1.598-4.398-1.112-4.398-1.452-4.398
072.682-3.124-2.232-4.398-1.973-4.398-3.124-4.398-0.218-4.398-4.398-4.398-2.232-3.124-4.398-4.398
08-1.112-4.3982.726-3.124-4.398-3.124-3.124-4.398-4.398-4.398-1.973-4.398-4.398-4.398-4.398-4.398
09-4.398-4.398-1.213-3.124-4.398-4.398-3.124-4.398-2.582-2.5822.724-2.582-4.398-4.398-4.398-3.124
10-4.398-4.398-4.398-2.582-4.398-4.398-4.398-2.5820.318-4.3980.1692.567-4.398-4.398-2.582-2.582
11-2.5820.246-3.124-4.398-4.398-4.398-4.398-4.398-4.3980.221-4.398-4.398-4.3982.4620.056-0.786
12-2.582-4.398-4.398-4.3982.61-3.124-0.597-2.582-0.038-3.124-3.124-2.582-0.936-3.124-3.124-4.398
131.0841.8480.871.205-4.398-2.582-4.398-3.124-3.124-1.598-1.973-1.326-4.398-2.232-3.124-4.398
140.294-0.786-0.006-1.4521.1570.632-0.7860.195-0.488-0.7860.056-0.786-0.39-0.179-0.1060.221