We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorESRRA
(GeneCards)
ModelERR1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusbYSAAGGTCAhhndv
Best auROC (human)0.956
Best auROC (mouse)0.974
Peak sets in benchmark (human)31
Peak sets in benchmark (mouse)3
Aligned words284
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
HGNCHGNC:3471
EntrezGeneGeneID:2101
(SSTAR profile)
UniProt IDERR1_HUMAN
UniProt ACP11474
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.0839099999999995
0.0005 5.22556
0.0001 7.49891
GTEx tissue expression atlas ESRRA expression
ReMap ChIP-seq dataset list ESRRA datasets
Motifs in JASPAR
PCM
ACGT
0129.0116.065.074.0
0222.0111.014.0137.0
0329.0194.052.09.0
04260.02.019.03.0
05276.00.08.00.0
061.00.0281.02.0
072.01.0281.00.0
0818.01.013.0252.0
090.0262.015.07.0
10280.01.02.01.0
1167.0122.040.055.0
12119.056.052.057.0
1342.098.086.058.0
14117.049.055.063.0
1559.069.0113.043.0
PWM
ACGT
01-0.8680.483-0.0860.041
02-1.1290.44-1.5470.648
03-0.8680.993-0.304-1.939
041.284-3.055-1.266-2.798
051.343-3.937-2.04-3.937
06-3.402-3.9371.361-3.055
07-3.055-3.4021.361-3.937
08-1.316-3.402-1.6141.253
09-3.9371.291-1.484-2.153
101.357-3.402-3.055-3.402
11-0.0570.533-0.559-0.25
120.509-0.232-0.304-0.215
13-0.5120.3170.188-0.198
140.492-0.362-0.25-0.117
15-0.181-0.0280.457-0.489