Model info
| Transcription factor | ESRRA (GeneCards) | ||||||||
| Model | ERR1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bYSAAGGTCAhhndv | ||||||||
| Best auROC (human) | 0.956 | ||||||||
| Best auROC (mouse) | 0.974 | ||||||||
| Peak sets in benchmark (human) | 31 | ||||||||
| Peak sets in benchmark (mouse) | 3 | ||||||||
| Aligned words | 284 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
| HGNC | HGNC:3471 | ||||||||
| EntrezGene | GeneID:2101 (SSTAR profile) | ||||||||
| UniProt ID | ERR1_HUMAN | ||||||||
| UniProt AC | P11474 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ESRRA expression | ||||||||
| ReMap ChIP-seq dataset list | ESRRA datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 29.0 | 116.0 | 65.0 | 74.0 |
| 02 | 22.0 | 111.0 | 14.0 | 137.0 |
| 03 | 29.0 | 194.0 | 52.0 | 9.0 |
| 04 | 260.0 | 2.0 | 19.0 | 3.0 |
| 05 | 276.0 | 0.0 | 8.0 | 0.0 |
| 06 | 1.0 | 0.0 | 281.0 | 2.0 |
| 07 | 2.0 | 1.0 | 281.0 | 0.0 |
| 08 | 18.0 | 1.0 | 13.0 | 252.0 |
| 09 | 0.0 | 262.0 | 15.0 | 7.0 |
| 10 | 280.0 | 1.0 | 2.0 | 1.0 |
| 11 | 67.0 | 122.0 | 40.0 | 55.0 |
| 12 | 119.0 | 56.0 | 52.0 | 57.0 |
| 13 | 42.0 | 98.0 | 86.0 | 58.0 |
| 14 | 117.0 | 49.0 | 55.0 | 63.0 |
| 15 | 59.0 | 69.0 | 113.0 | 43.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.868 | 0.483 | -0.086 | 0.041 |
| 02 | -1.129 | 0.44 | -1.547 | 0.648 |
| 03 | -0.868 | 0.993 | -0.304 | -1.939 |
| 04 | 1.284 | -3.055 | -1.266 | -2.798 |
| 05 | 1.343 | -3.937 | -2.04 | -3.937 |
| 06 | -3.402 | -3.937 | 1.361 | -3.055 |
| 07 | -3.055 | -3.402 | 1.361 | -3.937 |
| 08 | -1.316 | -3.402 | -1.614 | 1.253 |
| 09 | -3.937 | 1.291 | -1.484 | -2.153 |
| 10 | 1.357 | -3.402 | -3.055 | -3.402 |
| 11 | -0.057 | 0.533 | -0.559 | -0.25 |
| 12 | 0.509 | -0.232 | -0.304 | -0.215 |
| 13 | -0.512 | 0.317 | 0.188 | -0.198 |
| 14 | 0.492 | -0.362 | -0.25 | -0.117 |
| 15 | -0.181 | -0.028 | 0.457 | -0.489 |