Transcription factor | Esrra | ||||||||
Model | ERR1_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 16 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | nhdbYSAAGGTCAnnn | ||||||||
Best auROC (human) | 0.951 | ||||||||
Best auROC (mouse) | 0.989 | ||||||||
Peak sets in benchmark (human) | 31 | ||||||||
Peak sets in benchmark (mouse) | 3 | ||||||||
Aligned words | 533 | ||||||||
TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
MGI | MGI:1346831 | ||||||||
EntrezGene | GeneID:26379 (SSTAR profile) | ||||||||
UniProt ID | ERR1_MOUSE | ||||||||
UniProt AC | O08580 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Esrra expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 84.0 | 22.0 | 41.0 | 26.0 | 54.0 | 17.0 | 7.0 | 38.0 | 72.0 | 27.0 | 16.0 | 12.0 | 16.0 | 26.0 | 19.0 | 23.0 |
02 | 28.0 | 17.0 | 140.0 | 41.0 | 35.0 | 15.0 | 9.0 | 33.0 | 14.0 | 19.0 | 32.0 | 18.0 | 12.0 | 16.0 | 35.0 | 36.0 |
03 | 6.0 | 37.0 | 27.0 | 19.0 | 8.0 | 32.0 | 3.0 | 24.0 | 5.0 | 31.0 | 73.0 | 107.0 | 10.0 | 38.0 | 47.0 | 33.0 |
04 | 4.0 | 18.0 | 4.0 | 3.0 | 8.0 | 60.0 | 3.0 | 67.0 | 16.0 | 39.0 | 13.0 | 82.0 | 3.0 | 21.0 | 8.0 | 151.0 |
05 | 2.0 | 23.0 | 6.0 | 0.0 | 20.0 | 111.0 | 6.0 | 1.0 | 2.0 | 19.0 | 7.0 | 0.0 | 21.0 | 220.0 | 61.0 | 1.0 |
06 | 14.0 | 0.0 | 30.0 | 1.0 | 369.0 | 0.0 | 1.0 | 3.0 | 76.0 | 0.0 | 4.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 |
07 | 455.0 | 1.0 | 4.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 35.0 | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 | 0.0 | 0.0 |
08 | 0.0 | 0.0 | 492.0 | 2.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 5.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
09 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 495.0 | 1.0 | 0.0 | 0.0 | 3.0 | 0.0 |
10 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 24.0 | 472.0 | 0.0 | 0.0 | 0.0 | 1.0 |
11 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 23.0 | 0.0 | 1.0 | 0.0 | 450.0 | 9.0 | 15.0 |
12 | 0.0 | 0.0 | 0.0 | 0.0 | 464.0 | 2.0 | 9.0 | 0.0 | 8.0 | 1.0 | 0.0 | 0.0 | 15.0 | 0.0 | 1.0 | 0.0 |
13 | 80.0 | 148.0 | 94.0 | 165.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 | 6.0 | 1.0 | 3.0 | 0.0 | 0.0 | 0.0 | 0.0 |
14 | 31.0 | 9.0 | 30.0 | 10.0 | 46.0 | 82.0 | 9.0 | 20.0 | 26.0 | 27.0 | 27.0 | 15.0 | 17.0 | 72.0 | 40.0 | 39.0 |
15 | 17.0 | 25.0 | 62.0 | 16.0 | 25.0 | 93.0 | 10.0 | 62.0 | 16.0 | 25.0 | 46.0 | 19.0 | 12.0 | 24.0 | 28.0 | 20.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.981 | -0.346 | 0.269 | -0.181 | 0.542 | -0.599 | -1.454 | 0.193 | 0.828 | -0.144 | -0.658 | -0.938 | -0.658 | -0.181 | -0.49 | -0.302 |
02 | -0.108 | -0.599 | 1.49 | 0.269 | 0.112 | -0.721 | -1.215 | 0.054 | -0.788 | -0.49 | 0.023 | -0.543 | -0.938 | -0.658 | 0.112 | 0.14 |
03 | -1.6 | 0.167 | -0.144 | -0.49 | -1.328 | 0.023 | -2.234 | -0.26 | -1.77 | -0.008 | 0.841 | 1.222 | -1.114 | 0.193 | 0.404 | 0.054 |
04 | -1.975 | -0.543 | -1.975 | -2.234 | -1.328 | 0.646 | -2.234 | 0.756 | -0.658 | 0.219 | -0.86 | 0.957 | -2.234 | -0.392 | -1.328 | 1.565 |
05 | -2.584 | -0.302 | -1.6 | -4.4 | -0.439 | 1.259 | -1.6 | -3.126 | -2.584 | -0.49 | -1.454 | -4.4 | -0.392 | 1.941 | 0.663 | -3.126 |
06 | -0.788 | -4.4 | -0.04 | -3.126 | 2.457 | -4.4 | -3.126 | -2.234 | 0.881 | -4.4 | -1.975 | -4.4 | -3.126 | -3.126 | -4.4 | -4.4 |
07 | 2.667 | -3.126 | -1.975 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | 0.112 | -4.4 | -4.4 | -4.4 | -1.975 | -4.4 | -4.4 | -4.4 |
08 | -4.4 | -4.4 | 2.745 | -2.584 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -1.77 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
09 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | 2.751 | -3.126 | -4.4 | -4.4 | -2.234 | -4.4 |
10 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -3.126 | -0.26 | 2.703 | -4.4 | -4.4 | -4.4 | -3.126 |
11 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -0.302 | -4.4 | -3.126 | -4.4 | 2.656 | -1.215 | -0.721 |
12 | -4.4 | -4.4 | -4.4 | -4.4 | 2.686 | -2.584 | -1.215 | -4.4 | -1.328 | -3.126 | -4.4 | -4.4 | -0.721 | -4.4 | -3.126 | -4.4 |
13 | 0.932 | 1.545 | 1.093 | 1.654 | -4.4 | -2.234 | -4.4 | -4.4 | -4.4 | -1.6 | -3.126 | -2.234 | -4.4 | -4.4 | -4.4 | -4.4 |
14 | -0.008 | -1.215 | -0.04 | -1.114 | 0.383 | 0.957 | -1.215 | -0.439 | -0.181 | -0.144 | -0.144 | -0.721 | -0.599 | 0.828 | 0.244 | 0.219 |
15 | -0.599 | -0.22 | 0.679 | -0.658 | -0.22 | 1.082 | -1.114 | 0.679 | -0.658 | -0.22 | 0.383 | -0.49 | -0.938 | -0.26 | -0.108 | -0.439 |