Model info
| Transcription factor | Esrrb | ||||||||
| Model | ERR2_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 17 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dhdbYCAAGGTCAhhbh | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.966 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 14 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
| MGI | MGI:1346832 | ||||||||
| EntrezGene | GeneID:26380 (SSTAR profile) | ||||||||
| UniProt ID | ERR2_MOUSE | ||||||||
| UniProt AC | Q61539 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Esrrb expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 202.0 | 76.0 | 144.0 | 78.0 |
| 02 | 272.0 | 65.0 | 59.0 | 104.0 |
| 03 | 108.0 | 51.0 | 253.0 | 88.0 |
| 04 | 30.0 | 94.0 | 90.0 | 286.0 |
| 05 | 23.0 | 84.0 | 10.0 | 383.0 |
| 06 | 24.0 | 428.0 | 47.0 | 1.0 |
| 07 | 443.0 | 36.0 | 16.0 | 5.0 |
| 08 | 480.0 | 0.0 | 18.0 | 2.0 |
| 09 | 12.0 | 2.0 | 479.0 | 7.0 |
| 10 | 1.0 | 5.0 | 485.0 | 9.0 |
| 11 | 24.0 | 4.0 | 12.0 | 460.0 |
| 12 | 5.0 | 468.0 | 9.0 | 18.0 |
| 13 | 452.0 | 32.0 | 7.0 | 9.0 |
| 14 | 81.0 | 127.0 | 73.0 | 219.0 |
| 15 | 118.0 | 221.0 | 66.0 | 95.0 |
| 16 | 52.0 | 234.0 | 85.0 | 129.0 |
| 17 | 124.0 | 80.0 | 74.0 | 222.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.475 | -0.49 | 0.14 | -0.464 |
| 02 | 0.771 | -0.643 | -0.737 | -0.181 |
| 03 | -0.144 | -0.879 | 0.699 | -0.346 |
| 04 | -1.389 | -0.281 | -0.324 | 0.821 |
| 05 | -1.64 | -0.392 | -2.394 | 1.111 |
| 06 | -1.6 | 1.222 | -0.958 | -3.903 |
| 07 | 1.256 | -1.215 | -1.975 | -2.961 |
| 08 | 1.336 | -4.4 | -1.868 | -3.573 |
| 09 | -2.234 | -3.573 | 1.334 | -2.694 |
| 10 | -3.903 | -2.961 | 1.347 | -2.484 |
| 11 | -1.6 | -3.126 | -2.234 | 1.294 |
| 12 | -2.961 | 1.311 | -2.484 | -1.868 |
| 13 | 1.276 | -1.328 | -2.694 | -2.484 |
| 14 | -0.427 | 0.016 | -0.529 | 0.555 |
| 15 | -0.057 | 0.565 | -0.628 | -0.271 |
| 16 | -0.86 | 0.621 | -0.38 | 0.031 |
| 17 | -0.008 | -0.439 | -0.516 | 0.569 |