Transcription factor | Esrrb | ||||||||
Model | ERR2_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 17 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | dhdbYCAAGGTCAhhbh | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | 0.966 | ||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | 14 | ||||||||
Aligned words | 502 | ||||||||
TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
MGI | MGI:1346832 | ||||||||
EntrezGene | GeneID:26380 (SSTAR profile) | ||||||||
UniProt ID | ERR2_MOUSE | ||||||||
UniProt AC | Q61539 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Esrrb expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 202.0 | 76.0 | 144.0 | 78.0 |
02 | 272.0 | 65.0 | 59.0 | 104.0 |
03 | 108.0 | 51.0 | 253.0 | 88.0 |
04 | 30.0 | 94.0 | 90.0 | 286.0 |
05 | 23.0 | 84.0 | 10.0 | 383.0 |
06 | 24.0 | 428.0 | 47.0 | 1.0 |
07 | 443.0 | 36.0 | 16.0 | 5.0 |
08 | 480.0 | 0.0 | 18.0 | 2.0 |
09 | 12.0 | 2.0 | 479.0 | 7.0 |
10 | 1.0 | 5.0 | 485.0 | 9.0 |
11 | 24.0 | 4.0 | 12.0 | 460.0 |
12 | 5.0 | 468.0 | 9.0 | 18.0 |
13 | 452.0 | 32.0 | 7.0 | 9.0 |
14 | 81.0 | 127.0 | 73.0 | 219.0 |
15 | 118.0 | 221.0 | 66.0 | 95.0 |
16 | 52.0 | 234.0 | 85.0 | 129.0 |
17 | 124.0 | 80.0 | 74.0 | 222.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.475 | -0.49 | 0.14 | -0.464 |
02 | 0.771 | -0.643 | -0.737 | -0.181 |
03 | -0.144 | -0.879 | 0.699 | -0.346 |
04 | -1.389 | -0.281 | -0.324 | 0.821 |
05 | -1.64 | -0.392 | -2.394 | 1.111 |
06 | -1.6 | 1.222 | -0.958 | -3.903 |
07 | 1.256 | -1.215 | -1.975 | -2.961 |
08 | 1.336 | -4.4 | -1.868 | -3.573 |
09 | -2.234 | -3.573 | 1.334 | -2.694 |
10 | -3.903 | -2.961 | 1.347 | -2.484 |
11 | -1.6 | -3.126 | -2.234 | 1.294 |
12 | -2.961 | 1.311 | -2.484 | -1.868 |
13 | 1.276 | -1.328 | -2.694 | -2.484 |
14 | -0.427 | 0.016 | -0.529 | 0.555 |
15 | -0.057 | 0.565 | -0.628 | -0.271 |
16 | -0.86 | 0.621 | -0.38 | 0.031 |
17 | -0.008 | -0.439 | -0.516 | 0.569 |