Model info
| Transcription factor | Esrrg | ||||||||
| Model | ERR3_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bSAAGGWSAb | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.849 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 2 | ||||||||
| Aligned words | 242 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
| MGI | MGI:1347056 | ||||||||
| EntrezGene | GeneID:26381 (SSTAR profile) | ||||||||
| UniProt ID | ERR3_MOUSE | ||||||||
| UniProt AC | P62509 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Esrrg expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 20.0 | 60.0 | 53.0 | 109.0 |
| 02 | 6.0 | 177.0 | 56.0 | 3.0 |
| 03 | 230.0 | 4.0 | 7.0 | 1.0 |
| 04 | 233.0 | 1.0 | 6.0 | 2.0 |
| 05 | 9.0 | 0.0 | 231.0 | 2.0 |
| 06 | 1.0 | 6.0 | 230.0 | 5.0 |
| 07 | 52.0 | 8.0 | 35.0 | 147.0 |
| 08 | 5.0 | 181.0 | 45.0 | 11.0 |
| 09 | 210.0 | 11.0 | 17.0 | 4.0 |
| 10 | 23.0 | 123.0 | 61.0 | 35.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.063 | -0.008 | -0.129 | 0.579 |
| 02 | -2.127 | 1.059 | -0.076 | -2.65 |
| 03 | 1.319 | -2.444 | -2.0 | -3.261 |
| 04 | 1.332 | -3.261 | -2.127 | -2.909 |
| 05 | -1.786 | -3.809 | 1.323 | -2.909 |
| 06 | -3.261 | -2.127 | 1.319 | -2.273 |
| 07 | -0.148 | -1.887 | -0.531 | 0.875 |
| 08 | -2.273 | 1.081 | -0.288 | -1.61 |
| 09 | 1.229 | -1.61 | -1.214 | -2.444 |
| 10 | -0.932 | 0.698 | 0.008 | -0.531 |