We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorESR1
(GeneCards)
ModelESR1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusnbnRKGKCASCbTGMCCYn
Best auROC (human)0.981
Best auROC (mouse)0.996
Peak sets in benchmark (human)432
Peak sets in benchmark (mouse)58
Aligned words470
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
HGNCHGNC:3467
EntrezGeneGeneID:2099
(SSTAR profile)
UniProt IDESR1_HUMAN
UniProt ACP03372
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.06851
0.0005 8.167010000000001
0.0001 12.62846
GTEx tissue expression atlas ESR1 expression
ReMap ChIP-seq dataset list ESR1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0110.026.020.08.032.086.011.031.016.064.030.024.05.047.033.010.0
0212.016.025.010.068.067.023.065.014.038.027.015.07.030.029.07.0
0355.07.035.04.0104.010.027.010.066.011.023.04.018.03.072.04.0
0415.03.0200.025.06.00.014.011.019.00.0116.022.00.00.017.05.0
052.01.036.01.00.01.02.00.08.09.0317.013.02.06.052.03.0
061.01.06.04.04.06.02.05.026.032.054.0295.01.02.02.012.0
070.026.05.01.01.032.00.08.00.060.01.03.02.0273.025.016.0
082.00.00.01.0324.04.038.025.020.02.08.01.010.00.018.00.0
0921.0208.093.034.01.04.00.01.06.036.016.06.01.011.06.09.0
100.024.00.05.02.0159.00.098.00.098.00.017.00.032.00.018.0
110.02.00.00.052.0143.054.064.00.00.00.00.05.034.077.022.0
127.04.03.043.013.012.04.0150.03.017.05.0106.01.013.07.065.0
132.00.022.00.07.03.036.00.02.03.012.02.010.07.0347.00.0
1416.02.00.03.09.02.02.00.0273.096.016.032.00.01.01.00.0
154.0285.04.05.01.090.01.09.00.018.00.01.02.023.03.07.0
160.07.00.00.029.0371.00.016.00.08.00.00.02.018.02.00.0
172.08.08.013.012.0146.017.0229.00.00.00.02.00.09.03.04.0
183.01.06.04.051.028.030.054.03.06.013.06.030.054.0103.061.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.017-0.084-0.342-1.2310.1211.102-0.9250.09-0.5610.8080.057-0.163-1.6740.5020.151-1.017
02-0.84-0.561-0.123-1.0170.8680.854-0.2050.824-0.6910.291-0.047-0.624-1.3580.0570.024-1.358
030.658-1.3580.209-1.8791.291-1.017-0.047-1.0170.839-0.925-0.205-1.879-0.445-2.1380.925-1.879
04-0.624-2.1381.944-0.123-1.503-4.318-0.691-0.925-0.392-4.3181.4-0.248-4.318-4.318-0.501-1.674
05-2.489-3.0330.237-3.033-4.318-3.033-2.489-4.318-1.231-1.1182.403-0.763-2.489-1.5030.602-2.138
06-3.033-3.033-1.503-1.879-1.879-1.503-2.489-1.674-0.0840.1210.6392.332-3.033-2.489-2.489-0.84
07-4.318-0.084-1.674-3.033-3.0330.121-4.318-1.231-4.3180.744-3.033-2.138-2.4892.254-0.123-0.561
08-2.489-4.318-4.318-3.0332.425-1.8790.291-0.123-0.342-2.489-1.231-3.033-1.017-4.318-0.445-4.318
09-0.2941.9831.180.181-3.033-1.879-4.318-3.033-1.5030.237-0.561-1.503-3.033-0.925-1.503-1.118
10-4.318-0.163-4.318-1.674-2.4891.715-4.3181.232-4.3181.232-4.318-0.501-4.3180.121-4.318-0.445
11-4.318-2.489-4.318-4.3180.6021.6090.6390.808-4.318-4.318-4.318-4.318-1.6740.1810.992-0.248
12-1.358-1.879-2.1380.413-0.763-0.84-1.8791.656-2.138-0.501-1.6741.31-3.033-0.763-1.3580.824
13-2.489-4.318-0.248-4.318-1.358-2.1380.237-4.318-2.489-2.138-0.84-2.489-1.017-1.3582.494-4.318
14-0.561-2.489-4.318-2.138-1.118-2.489-2.489-4.3182.2541.212-0.5610.121-4.318-3.033-3.033-4.318
15-1.8792.297-1.879-1.674-3.0331.147-3.033-1.118-4.318-0.445-4.318-3.033-2.489-0.205-2.138-1.358
16-4.318-1.358-4.318-4.3180.0242.561-4.318-0.561-4.318-1.231-4.318-4.318-2.489-0.445-2.489-4.318
17-2.489-1.231-1.231-0.763-0.841.63-0.5012.079-4.318-4.318-4.318-2.489-4.318-1.118-2.138-1.879
18-2.138-3.033-1.503-1.8790.583-0.0110.0570.639-2.138-1.503-0.763-1.5030.0570.6391.2820.76