Model info
| Transcription factor | ESR1 (GeneCards) | ||||||||
| Model | ESR1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RGGKCAbCvWGMCCY | ||||||||
| Best auROC (human) | 0.971 | ||||||||
| Best auROC (mouse) | 0.995 | ||||||||
| Peak sets in benchmark (human) | 432 | ||||||||
| Peak sets in benchmark (mouse) | 58 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Steroid hormone receptors (NR3) {2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B) {2.1.1.2} | ||||||||
| HGNC | HGNC:3467 | ||||||||
| EntrezGene | GeneID:2099 (SSTAR profile) | ||||||||
| UniProt ID | ESR1_HUMAN | ||||||||
| UniProt AC | P03372 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ESR1 expression | ||||||||
| ReMap ChIP-seq dataset list | ESR1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 319.0 | 24.0 | 130.0 | 27.0 |
| 02 | 37.0 | 3.0 | 404.0 | 56.0 |
| 03 | 23.0 | 9.0 | 454.0 | 14.0 |
| 04 | 47.0 | 36.0 | 89.0 | 328.0 |
| 05 | 1.0 | 444.0 | 24.0 | 31.0 |
| 06 | 428.0 | 3.0 | 56.0 | 13.0 |
| 07 | 54.0 | 221.0 | 156.0 | 69.0 |
| 08 | 198.0 | 302.0 | 0.0 | 0.0 |
| 09 | 91.0 | 188.0 | 143.0 | 78.0 |
| 10 | 52.0 | 39.0 | 22.0 | 387.0 |
| 11 | 27.0 | 17.0 | 454.0 | 2.0 |
| 12 | 309.0 | 99.0 | 35.0 | 57.0 |
| 13 | 20.0 | 442.0 | 7.0 | 31.0 |
| 14 | 45.0 | 411.0 | 4.0 | 40.0 |
| 15 | 29.0 | 165.0 | 33.0 | 273.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.929 | -1.6 | 0.039 | -1.489 |
| 02 | -1.189 | -3.325 | 1.165 | -0.788 |
| 03 | -1.64 | -2.484 | 1.281 | -2.096 |
| 04 | -0.958 | -1.215 | -0.335 | 0.957 |
| 05 | -3.903 | 1.259 | -1.6 | -1.358 |
| 06 | 1.222 | -3.325 | -0.788 | -2.163 |
| 07 | -0.823 | 0.565 | 0.219 | -0.584 |
| 08 | 0.455 | 0.875 | -4.4 | -4.4 |
| 09 | -0.313 | 0.404 | 0.133 | -0.464 |
| 10 | -0.86 | -1.138 | -1.681 | 1.122 |
| 11 | -1.489 | -1.92 | 1.281 | -3.573 |
| 12 | 0.898 | -0.23 | -1.242 | -0.771 |
| 13 | -1.77 | 1.254 | -2.694 | -1.358 |
| 14 | -1.0 | 1.182 | -3.126 | -1.114 |
| 15 | -1.421 | 0.275 | -1.298 | 0.774 |