We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorESR1
(GeneCards)
ModelESR1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusRGGKCAbCvWGMCCY
Best auROC (human)0.971
Best auROC (mouse)0.995
Peak sets in benchmark (human)432
Peak sets in benchmark (mouse)58
Aligned words500
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
HGNCHGNC:3467
EntrezGeneGeneID:2099
(SSTAR profile)
UniProt IDESR1_HUMAN
UniProt ACP03372
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7488099999999998
0.0005 4.76291
0.0001 6.8887100000000006
GTEx tissue expression atlas ESR1 expression
ReMap ChIP-seq dataset list ESR1 datasets
Motifs in JASPAR
PCM
ACGT
01319.024.0130.027.0
0237.03.0404.056.0
0323.09.0454.014.0
0447.036.089.0328.0
051.0444.024.031.0
06428.03.056.013.0
0754.0221.0156.069.0
08198.0302.00.00.0
0991.0188.0143.078.0
1052.039.022.0387.0
1127.017.0454.02.0
12309.099.035.057.0
1320.0442.07.031.0
1445.0411.04.040.0
1529.0165.033.0273.0
PWM
ACGT
010.929-1.60.039-1.489
02-1.189-3.3251.165-0.788
03-1.64-2.4841.281-2.096
04-0.958-1.215-0.3350.957
05-3.9031.259-1.6-1.358
061.222-3.325-0.788-2.163
07-0.8230.5650.219-0.584
080.4550.875-4.4-4.4
09-0.3130.4040.133-0.464
10-0.86-1.138-1.6811.122
11-1.489-1.921.281-3.573
120.898-0.23-1.242-0.771
13-1.771.254-2.694-1.358
14-1.01.182-3.126-1.114
15-1.4210.275-1.2980.774