We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEsr1
ModelESR1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnRGGKCASCvTGMCMYn
Best auROC (human)0.976
Best auROC (mouse)0.996
Peak sets in benchmark (human)432
Peak sets in benchmark (mouse)58
Aligned words527
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
MGIMGI:1352467
EntrezGeneGeneID:13982
(SSTAR profile)
UniProt IDESR1_MOUSE
UniProt ACP19785
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.95326
0.0005 9.93651
0.0001 14.118210000000001
GTEx tissue expression atlas Esr1 expression
Motifs in JASPAR
MA0112.1 (ESR1; Mus musculus/Rattus norvegicus/Xenopus laevis/Xenopus (Silurana) tropicalis/Gallus gallus/Homo sapiens/Bos taurus/Oryctolagus cuniculus)
MA0112.2 (ESR1; Homo sapiens)
MA0112.3 (ESR1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0152.010.052.05.0123.08.016.019.079.06.030.05.021.08.057.08.0
0211.04.0236.024.03.00.018.011.07.00.0121.027.03.00.031.03.0
030.00.024.00.02.01.01.00.033.015.0344.014.02.01.062.00.0
049.03.015.010.07.01.00.09.052.018.081.0280.01.01.03.09.0
053.056.07.03.00.021.00.02.00.091.01.07.03.0244.044.017.0
063.00.03.00.0371.05.021.015.035.03.013.01.016.02.010.01.0
0727.0242.0117.039.01.05.00.04.04.028.07.08.00.012.02.03.0
0810.022.00.00.0132.0155.00.00.041.085.00.00.07.047.00.00.0
0927.058.0100.05.070.0149.033.057.00.00.00.00.00.00.00.00.0
106.08.03.080.018.07.01.0181.010.010.02.0111.02.013.06.041.0
114.02.030.00.017.04.017.00.01.01.010.00.018.010.0385.00.0
1226.07.06.01.013.02.00.02.0282.085.024.051.00.00.00.00.0
138.0302.08.03.06.079.00.09.01.025.01.03.07.038.04.05.0
141.018.01.02.091.0313.01.039.02.011.00.00.01.016.02.01.0
157.037.09.042.016.0111.012.0219.00.01.00.03.02.018.04.018.0
169.05.06.05.068.027.08.064.05.07.06.07.031.074.0114.063.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.506-1.1120.506-1.7681.363-1.326-0.656-0.4880.922-1.598-0.038-1.768-0.39-1.3260.597-1.326
02-1.02-1.9732.013-0.258-2.232-4.398-0.541-1.02-1.452-4.3981.347-0.142-2.232-4.398-0.006-2.232
03-4.398-4.398-0.258-4.398-2.582-3.124-3.124-4.3980.056-0.7192.389-0.786-2.582-3.1240.681-4.398
04-1.213-2.232-0.719-1.112-1.452-3.124-4.398-1.2130.506-0.5410.9472.184-3.124-3.124-2.232-1.213
05-2.2320.58-1.452-2.232-4.398-0.39-4.398-2.582-4.3981.063-3.124-1.452-2.2322.0460.341-0.597
06-2.232-4.398-2.232-4.3982.465-1.768-0.39-0.7190.114-2.232-0.858-3.124-0.656-2.582-1.112-3.124
07-0.1422.0381.3130.221-3.124-1.768-4.398-1.973-1.973-0.106-1.452-1.326-4.398-0.936-2.582-2.232
08-1.112-0.344-4.398-4.3981.4331.594-4.398-4.3980.2710.995-4.398-4.398-1.4520.406-4.398-4.398
09-0.1420.6151.157-1.7680.8021.5540.0560.597-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398
10-1.598-1.326-2.2320.934-0.541-1.452-3.1241.748-1.112-1.112-2.5821.261-2.582-0.858-1.5980.271
11-1.973-2.582-0.038-4.398-0.597-1.973-0.597-4.398-3.124-3.124-1.112-4.398-0.541-1.1122.502-4.398
12-0.179-1.452-1.598-3.124-0.858-2.582-4.398-2.5822.1910.995-0.2580.487-4.398-4.398-4.398-4.398
13-1.3262.259-1.326-2.232-1.5980.922-4.398-1.213-3.124-0.218-3.124-2.232-1.4520.195-1.973-1.768
14-3.124-0.541-3.124-2.5821.0632.295-3.1240.221-2.582-1.02-4.398-4.398-3.124-0.656-2.582-3.124
15-1.4520.169-1.2130.294-0.6561.261-0.9361.938-4.398-3.124-4.398-2.232-2.582-0.541-1.973-0.541
16-1.213-1.768-1.598-1.7680.773-0.142-1.3260.713-1.768-1.452-1.598-1.452-0.0060.8571.2870.697