We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorESR2
(GeneCards)
ModelESR2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusRGGbCRbCbYGhCCY
Best auROC (human)0.944
Best auROC (mouse)0.941
Peak sets in benchmark (human)11
Peak sets in benchmark (mouse)7
Aligned words497
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
HGNCHGNC:3468
EntrezGeneGeneID:2100
(SSTAR profile)
UniProt IDESR2_HUMAN
UniProt ACQ92731
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.9938599999999997
0.0005 4.9040099999999995
0.0001 6.803610000000001
GTEx tissue expression atlas ESR2 expression
ReMap ChIP-seq dataset list ESR2 datasets
Motifs in JASPAR
MA0258.1 (ESR2; Homo sapiens)
MA0258.2 (ESR2; Homo sapiens)
PCM
ACGT
01246.048.0180.023.0
0257.06.0393.041.0
0323.013.0427.034.0
0448.058.0114.0277.0
058.0397.026.066.0
06309.017.0123.048.0
0746.0254.0132.065.0
080.0332.00.0165.0
0961.0210.0133.093.0
1020.0119.015.0343.0
1141.013.0443.00.0
12259.0136.043.059.0
1312.0420.011.054.0
1441.0421.06.029.0
1536.0177.018.0266.0
PWM
ACGT
010.677-0.9320.367-1.634
02-0.765-2.8131.143-1.084
03-1.634-2.1571.226-1.264
04-0.932-0.748-0.0850.795
05-2.5781.153-1.519-0.622
060.904-1.914-0.01-0.932
07-0.9730.7090.06-0.637
08-4.3950.975-4.3950.281
09-0.6990.520.067-0.286
10-1.764-0.043-2.0281.008
11-1.084-2.1571.262-4.395
120.7280.089-1.038-0.731
13-2.2281.209-2.305-0.817
14-1.0841.212-2.813-1.415
15-1.2090.35-1.8620.755