We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorESR2
(GeneCards)
ModelESR2_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length7
Quality
A
Motif rank
1
ConsensusRGGTCAS
Best auROC (human)0.879
Best auROC (mouse)0.851
Peak sets in benchmark (human)11
Peak sets in benchmark (mouse)7
Aligned words500
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
HGNCHGNC:3468
EntrezGeneGeneID:2100
(SSTAR profile)
UniProt IDESR2_HUMAN
UniProt ACQ92731
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.48354
0.0005 5.738239999999999
0.0001 7.717890000000001
GTEx tissue expression atlas ESR2 expression
ReMap ChIP-seq dataset list ESR2 datasets
Motifs in JASPAR
PCM
ACGT
01347.017.0131.05.0
028.01.0473.018.0
031.05.0491.03.0
049.08.052.0431.0
051.0496.01.02.0
06475.03.020.02.0
0735.0230.0200.035.0
PWM
ACGT
011.013-1.920.046-2.961
02-2.584-3.9031.322-1.868
03-3.903-2.9611.359-3.325
04-2.484-2.584-0.861.229
05-3.9031.369-3.903-3.573
061.326-3.325-1.77-3.573
07-1.2420.6040.465-1.242