We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorEsr2
ModelESR2_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length8
Quality
A
Motif rank
1
ConsensusRGGKCASn
Best auROC (human)0.859
Best auROC (mouse)0.85
Peak sets in benchmark (human)11
Peak sets in benchmark (mouse)7
Aligned words501
TF familySteroid hormone receptors (NR3) {2.1.1}
TF subfamilyER-like receptors (NR3A&B) {2.1.1.2}
MGIMGI:109392
EntrezGeneGeneID:13983
(SSTAR profile)
UniProt IDESR2_MOUSE
UniProt ACO08537
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.95198
0.0005 6.03298
0.0001 7.642379999999999
GTEx tissue expression atlas Esr2 expression
Motifs in JASPAR
MA0258.1 (ESR2; Homo sapiens)
MA0258.2 (ESR2; Homo sapiens)
PCM
ACGT
01317.08.0171.04.0
029.00.0484.07.0
030.06.0490.04.0
0425.07.0104.0364.0
055.0492.03.00.0
06494.02.00.04.0
0723.0128.0299.050.0
08125.0125.0217.033.0
PWM
ACGT
010.923-2.5840.31-3.126
02-2.484-4.41.345-2.694
03-4.4-2.8191.357-3.126
04-1.561-2.694-0.1811.061
05-2.9611.361-3.325-4.4
061.365-3.573-4.4-3.126
07-1.640.0230.865-0.898
080.00.00.546-1.298