We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorESX1
(GeneCards)
ModelESX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusvbTAATTAvbnhWWWWd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8289
TF familyPaired-related HD factors {3.1.3}
TF subfamilyESX {3.1.3.8}
HGNCHGNC:14865
EntrezGeneGeneID:80712
(SSTAR profile)
UniProt IDESX1_HUMAN
UniProt ACQ8N693
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.45406
0.0005 5.8148599999999995
0.0001 8.38696
GTEx tissue expression atlas ESX1 expression
ReMap ChIP-seq dataset list ESX1 datasets
Motifs in JASPAR
MA0644.1 (ESX1; Homo sapiens)
PCM
ACGT
011936.1181720.0783523.6071079.984
021047.83264.8691588.5132358.607
03186.503413.233175.3877484.665
048206.61611.01127.74414.417
058258.6520.01.1350.0
060.00.028.0878231.701
072.03256.77225.1598175.826
084810.760.03449.0280.0
092038.5531825.7844114.888280.563
10641.3224378.166946.2222294.077
112427.8132150.1651779.0441902.766
123140.4411593.337627.4262898.584
133638.286505.603313.0543802.845
144455.515286.176169.9433348.154
154046.543167.003128.5163917.726
162330.959480.223551.8754896.731
172642.21990.5331283.7793343.265
PWM
ACGT
01-0.064-0.1830.534-0.647
02-0.6770.458-0.2620.133
03-2.393-1.604-2.4541.287
041.379-5.049-4.233-4.82
051.385-6.821-6.413-6.821
06-6.821-6.821-4.2211.382
07-6.178-3.556-4.3231.375
080.845-6.8210.513-6.821
09-0.013-0.1230.689-1.989
10-1.1670.751-0.7790.105
110.1620.04-0.149-0.082
120.419-0.259-1.1890.339
130.566-1.404-1.880.61
140.768-1.969-2.4850.483
150.672-2.503-2.7610.64
160.121-1.455-1.3170.863
170.246-0.733-0.4750.481