Model info
| Transcription factor | ETS2 (GeneCards) | ||||||||
| Model | ETS2_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | ddvdRGAARvRdv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.836 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 12 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| HGNC | HGNC:3489 | ||||||||
| EntrezGene | GeneID:2114 (SSTAR profile) | ||||||||
| UniProt ID | ETS2_HUMAN | ||||||||
| UniProt AC | P15036 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ETS2 expression | ||||||||
| ReMap ChIP-seq dataset list | ETS2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 115.0 | 70.0 | 218.0 | 97.0 |
| 02 | 159.0 | 73.0 | 173.0 | 95.0 |
| 03 | 161.0 | 140.0 | 149.0 | 50.0 |
| 04 | 237.0 | 38.0 | 183.0 | 42.0 |
| 05 | 96.0 | 4.0 | 376.0 | 24.0 |
| 06 | 2.0 | 5.0 | 484.0 | 9.0 |
| 07 | 491.0 | 8.0 | 0.0 | 1.0 |
| 08 | 477.0 | 9.0 | 12.0 | 2.0 |
| 09 | 191.0 | 42.0 | 260.0 | 7.0 |
| 10 | 196.0 | 131.0 | 99.0 | 74.0 |
| 11 | 211.0 | 24.0 | 230.0 | 35.0 |
| 12 | 165.0 | 43.0 | 248.0 | 44.0 |
| 13 | 248.0 | 50.0 | 160.0 | 42.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.082 | -0.57 | 0.551 | -0.25 |
| 02 | 0.238 | -0.529 | 0.322 | -0.271 |
| 03 | 0.25 | 0.112 | 0.174 | -0.898 |
| 04 | 0.634 | -1.163 | 0.377 | -1.067 |
| 05 | -0.26 | -3.126 | 1.093 | -1.6 |
| 06 | -3.573 | -2.961 | 1.345 | -2.484 |
| 07 | 1.359 | -2.584 | -4.4 | -3.903 |
| 08 | 1.33 | -2.484 | -2.234 | -3.573 |
| 09 | 0.42 | -1.067 | 0.726 | -2.694 |
| 10 | 0.445 | 0.046 | -0.23 | -0.516 |
| 11 | 0.519 | -1.6 | 0.604 | -1.242 |
| 12 | 0.275 | -1.044 | 0.679 | -1.022 |
| 13 | 0.679 | -0.898 | 0.244 | -1.067 |