We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorETV1
(GeneCards)
ModelETV1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusvdCCGGAAGbdv
Best auROC (human)0.95
Best auROC (mouse)
Peak sets in benchmark (human)8
Peak sets in benchmark (mouse)
Aligned words499
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
HGNCHGNC:3490
EntrezGeneGeneID:2115
(SSTAR profile)
UniProt IDETV1_HUMAN
UniProt ACP50549
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.1508899999999995
0.0005 8.641595
0.0001 13.38379
GTEx tissue expression atlas ETV1 expression
ReMap ChIP-seq dataset list ETV1 datasets
Motifs in JASPAR
MA0761.1 (ETV1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0138.01.032.08.045.022.025.038.077.027.0107.014.012.09.027.010.0
027.0141.024.00.02.057.00.00.09.0155.027.00.01.065.04.00.0
034.012.00.03.094.0323.00.01.015.040.00.00.00.00.00.00.0
041.00.0112.00.01.00.0374.00.00.00.00.00.00.00.04.00.0
050.00.02.00.00.00.00.00.00.00.0490.00.00.00.00.00.0
060.00.00.00.00.00.00.00.0491.00.01.00.00.00.00.00.0
07446.00.01.044.00.00.00.00.01.00.00.00.00.00.00.00.0
0831.022.0392.02.00.00.00.00.01.00.00.00.06.01.037.00.0
093.09.04.022.01.04.01.017.029.0122.062.0216.00.01.00.01.0
101.01.029.02.028.022.062.024.033.014.017.03.032.029.0153.042.0
1131.014.039.010.011.019.027.09.067.083.082.029.07.024.028.012.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.209-3.1110.039-1.3120.377-0.33-0.2040.2090.91-0.1281.238-0.772-0.922-1.199-0.128-1.098
02-1.4391.513-0.244-4.387-2.5680.611-4.387-4.387-1.1991.608-0.128-4.387-3.1110.742-1.96-4.387
03-1.96-0.922-4.387-2.2181.1092.34-4.387-3.111-0.7050.26-4.387-4.387-4.387-4.387-4.387-4.387
04-3.111-4.3871.284-4.387-3.111-4.3872.487-4.387-4.387-4.387-4.387-4.387-4.387-4.387-1.96-4.387
05-4.387-4.387-2.568-4.387-4.387-4.387-4.387-4.387-4.387-4.3872.757-4.387-4.387-4.387-4.387-4.387
06-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.3872.759-4.387-3.111-4.387-4.387-4.387-4.387-4.387
072.663-4.387-3.1110.355-4.387-4.387-4.387-4.387-3.111-4.387-4.387-4.387-4.387-4.387-4.387-4.387
080.008-0.332.534-2.568-4.387-4.387-4.387-4.387-3.111-4.387-4.387-4.387-1.584-3.1110.183-4.387
09-2.218-1.199-1.96-0.33-3.111-1.96-3.111-0.583-0.0581.3690.6951.939-4.387-3.111-4.387-3.111
10-3.111-3.111-0.058-2.568-0.092-0.330.695-0.2440.07-0.772-0.583-2.2180.039-0.0581.5950.308
110.008-0.7720.235-1.098-1.006-0.474-0.128-1.1990.7720.9850.973-0.058-1.439-0.244-0.092-0.922