Model info
| Transcription factor | ETV1 (GeneCards) | ||||||||
| Model | ETV1_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvCCGGAAGbv | ||||||||
| Best auROC (human) | 0.941 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 8 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Elk-like factors {3.5.2.2} | ||||||||
| HGNC | HGNC:3490 | ||||||||
| EntrezGene | GeneID:2115 (SSTAR profile) | ||||||||
| UniProt ID | ETV1_HUMAN | ||||||||
| UniProt AC | P50549 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ETV1 expression | ||||||||
| ReMap ChIP-seq dataset list | ETV1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 75.0 | 122.0 | 242.0 | 61.0 |
| 02 | 165.0 | 67.0 | 203.0 | 65.0 |
| 03 | 21.0 | 407.0 | 72.0 | 0.0 |
| 04 | 108.0 | 383.0 | 1.0 | 8.0 |
| 05 | 2.0 | 0.0 | 498.0 | 0.0 |
| 06 | 0.0 | 0.0 | 500.0 | 0.0 |
| 07 | 499.0 | 0.0 | 1.0 | 0.0 |
| 08 | 465.0 | 2.0 | 0.0 | 33.0 |
| 09 | 38.0 | 18.0 | 434.0 | 10.0 |
| 10 | 44.0 | 152.0 | 71.0 | 233.0 |
| 11 | 97.0 | 74.0 | 263.0 | 66.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.503 | -0.024 | 0.655 | -0.705 |
| 02 | 0.275 | -0.613 | 0.48 | -0.643 |
| 03 | -1.725 | 1.172 | -0.543 | -4.4 |
| 04 | -0.144 | 1.111 | -3.903 | -2.584 |
| 05 | -3.573 | -4.4 | 1.373 | -4.4 |
| 06 | -4.4 | -4.4 | 1.377 | -4.4 |
| 07 | 1.375 | -4.4 | -3.903 | -4.4 |
| 08 | 1.305 | -3.573 | -4.4 | -1.298 |
| 09 | -1.163 | -1.868 | 1.236 | -2.394 |
| 10 | -1.022 | 0.193 | -0.556 | 0.617 |
| 11 | -0.25 | -0.516 | 0.737 | -0.628 |