Model info
| Transcription factor | ETV2 (GeneCards) | ||||||||
| Model | ETV2_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 16 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvRRCAGGAARYvSv | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.981 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 6 | ||||||||
| Aligned words | 230 | ||||||||
| TF family | Ets-related factors {3.5.2} | ||||||||
| TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
| HGNC | HGNC:3491 | ||||||||
| EntrezGene | GeneID:2116 (SSTAR profile) | ||||||||
| UniProt ID | ETV2_HUMAN | ||||||||
| UniProt AC | O00321 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ETV2 expression | ||||||||
| ReMap ChIP-seq dataset list | ETV2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 74.0 | 40.0 | 81.0 | 34.0 |
| 02 | 69.0 | 40.0 | 100.0 | 20.0 |
| 03 | 133.0 | 31.0 | 47.0 | 18.0 |
| 04 | 121.0 | 14.0 | 88.0 | 6.0 |
| 05 | 129.0 | 9.0 | 89.0 | 2.0 |
| 06 | 6.0 | 200.0 | 21.0 | 2.0 |
| 07 | 204.0 | 24.0 | 0.0 | 1.0 |
| 08 | 0.0 | 0.0 | 229.0 | 0.0 |
| 09 | 0.0 | 1.0 | 228.0 | 0.0 |
| 10 | 226.0 | 0.0 | 3.0 | 0.0 |
| 11 | 213.0 | 0.0 | 0.0 | 16.0 |
| 12 | 109.0 | 4.0 | 116.0 | 0.0 |
| 13 | 13.0 | 74.0 | 13.0 | 129.0 |
| 14 | 80.0 | 31.0 | 93.0 | 25.0 |
| 15 | 25.0 | 60.0 | 130.0 | 14.0 |
| 16 | 40.0 | 66.0 | 100.0 | 23.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.251 | -0.349 | 0.34 | -0.505 |
| 02 | 0.183 | -0.349 | 0.548 | -1.009 |
| 03 | 0.83 | -0.594 | -0.192 | -1.108 |
| 04 | 0.736 | -1.339 | 0.422 | -2.075 |
| 05 | 0.799 | -1.733 | 0.433 | -2.859 |
| 06 | -2.075 | 1.234 | -0.964 | -2.859 |
| 07 | 1.254 | -0.838 | -3.765 | -3.213 |
| 08 | -3.765 | -3.765 | 1.369 | -3.765 |
| 09 | -3.765 | -3.213 | 1.364 | -3.765 |
| 10 | 1.356 | -3.765 | -2.599 | -3.765 |
| 11 | 1.297 | -3.765 | -3.765 | -1.217 |
| 12 | 0.633 | -2.392 | 0.694 | -3.765 |
| 13 | -1.407 | 0.251 | -1.407 | 0.799 |
| 14 | 0.328 | -0.594 | 0.476 | -0.799 |
| 15 | -0.799 | 0.046 | 0.807 | -1.339 |
| 16 | -0.349 | 0.139 | 0.548 | -0.878 |