Transcription factor | Etv2 | ||||||||
Model | ETV2_MOUSE.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 17 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | vvdvRCAGGAARYdSvn | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | 0.985 | ||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | 6 | ||||||||
Aligned words | 526 | ||||||||
TF family | Ets-related factors {3.5.2} | ||||||||
TF subfamily | Ets-like factors {3.5.2.1} | ||||||||
MGI | MGI:99253 | ||||||||
EntrezGene | GeneID:14008 (SSTAR profile) | ||||||||
UniProt ID | ETV2_MOUSE | ||||||||
UniProt AC | P41163 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Etv2 expression | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 55.0 | 28.0 | 56.0 | 16.0 | 41.0 | 36.0 | 18.0 | 19.0 | 25.0 | 31.0 | 95.0 | 21.0 | 5.0 | 21.0 | 30.0 | 3.0 |
02 | 58.0 | 3.0 | 48.0 | 17.0 | 73.0 | 15.0 | 4.0 | 24.0 | 90.0 | 25.0 | 63.0 | 21.0 | 14.0 | 9.0 | 30.0 | 6.0 |
03 | 109.0 | 27.0 | 94.0 | 5.0 | 25.0 | 13.0 | 10.0 | 4.0 | 56.0 | 20.0 | 66.0 | 3.0 | 16.0 | 11.0 | 32.0 | 9.0 |
04 | 163.0 | 3.0 | 38.0 | 2.0 | 63.0 | 2.0 | 6.0 | 0.0 | 87.0 | 12.0 | 97.0 | 6.0 | 12.0 | 2.0 | 7.0 | 0.0 |
05 | 24.0 | 263.0 | 38.0 | 0.0 | 0.0 | 18.0 | 1.0 | 0.0 | 21.0 | 111.0 | 16.0 | 0.0 | 0.0 | 6.0 | 2.0 | 0.0 |
06 | 34.0 | 11.0 | 0.0 | 0.0 | 356.0 | 42.0 | 0.0 | 0.0 | 32.0 | 25.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
07 | 0.0 | 0.0 | 421.0 | 1.0 | 0.0 | 0.0 | 78.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
08 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 497.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
09 | 1.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 | 496.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
10 | 481.0 | 2.0 | 2.0 | 14.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
11 | 214.0 | 3.0 | 264.0 | 0.0 | 2.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 6.0 | 0.0 | 8.0 | 0.0 |
12 | 3.0 | 79.0 | 15.0 | 125.0 | 0.0 | 0.0 | 1.0 | 2.0 | 25.0 | 72.0 | 19.0 | 159.0 | 0.0 | 0.0 | 0.0 | 0.0 |
13 | 7.0 | 0.0 | 17.0 | 4.0 | 77.0 | 15.0 | 29.0 | 30.0 | 19.0 | 2.0 | 14.0 | 0.0 | 75.0 | 24.0 | 163.0 | 24.0 |
14 | 22.0 | 25.0 | 118.0 | 13.0 | 10.0 | 18.0 | 8.0 | 5.0 | 21.0 | 49.0 | 144.0 | 9.0 | 6.0 | 7.0 | 38.0 | 7.0 |
15 | 11.0 | 15.0 | 30.0 | 3.0 | 32.0 | 33.0 | 24.0 | 10.0 | 70.0 | 106.0 | 117.0 | 15.0 | 4.0 | 8.0 | 22.0 | 0.0 |
16 | 28.0 | 19.0 | 47.0 | 23.0 | 35.0 | 52.0 | 29.0 | 46.0 | 44.0 | 43.0 | 81.0 | 25.0 | 3.0 | 7.0 | 16.0 | 2.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.56 | -0.108 | 0.578 | -0.658 | 0.269 | 0.14 | -0.543 | -0.49 | -0.22 | -0.008 | 1.104 | -0.392 | -1.77 | -0.392 | -0.04 | -2.234 |
02 | 0.613 | -2.234 | 0.425 | -0.599 | 0.841 | -0.721 | -1.975 | -0.26 | 1.05 | -0.22 | 0.695 | -0.392 | -0.788 | -1.215 | -0.04 | -1.6 |
03 | 1.241 | -0.144 | 1.093 | -1.77 | -0.22 | -0.86 | -1.114 | -1.975 | 0.578 | -0.439 | 0.741 | -2.234 | -0.658 | -1.022 | 0.023 | -1.215 |
04 | 1.642 | -2.234 | 0.193 | -2.584 | 0.695 | -2.584 | -1.6 | -4.4 | 1.016 | -0.938 | 1.124 | -1.6 | -0.938 | -2.584 | -1.454 | -4.4 |
05 | -0.26 | 2.119 | 0.193 | -4.4 | -4.4 | -0.543 | -3.126 | -4.4 | -0.392 | 1.259 | -0.658 | -4.4 | -4.4 | -1.6 | -2.584 | -4.4 |
06 | 0.083 | -1.022 | -4.4 | -4.4 | 2.422 | 0.293 | -4.4 | -4.4 | 0.023 | -0.22 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
07 | -4.4 | -4.4 | 2.589 | -3.126 | -4.4 | -4.4 | 0.907 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
08 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -3.126 | -3.126 | 2.755 | -4.4 | -4.4 | -3.126 | -4.4 | -4.4 |
09 | -3.126 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -4.4 | -4.4 | 2.753 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
10 | 2.722 | -2.584 | -2.584 | -0.788 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 | -4.4 |
11 | 1.913 | -2.234 | 2.123 | -4.4 | -2.584 | -4.4 | -3.126 | -4.4 | -4.4 | -4.4 | -2.584 | -4.4 | -1.6 | -4.4 | -1.328 | -4.4 |
12 | -2.234 | 0.92 | -0.721 | 1.377 | -4.4 | -4.4 | -3.126 | -2.584 | -0.22 | 0.828 | -0.49 | 1.617 | -4.4 | -4.4 | -4.4 | -4.4 |
13 | -1.454 | -4.4 | -0.599 | -1.975 | 0.894 | -0.721 | -0.074 | -0.04 | -0.49 | -2.584 | -0.788 | -4.4 | 0.868 | -0.26 | 1.642 | -0.26 |
14 | -0.346 | -0.22 | 1.32 | -0.86 | -1.114 | -0.543 | -1.328 | -1.77 | -0.392 | 0.445 | 1.518 | -1.215 | -1.6 | -1.454 | 0.193 | -1.454 |
15 | -1.022 | -0.721 | -0.04 | -2.234 | 0.023 | 0.054 | -0.26 | -1.114 | 0.8 | 1.213 | 1.311 | -0.721 | -1.975 | -1.328 | -0.346 | -4.4 |
16 | -0.108 | -0.49 | 0.404 | -0.302 | 0.112 | 0.504 | -0.074 | 0.383 | 0.339 | 0.316 | 0.945 | -0.22 | -2.234 | -1.454 | -0.658 | -2.584 |