We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorETV4
(GeneCards)
ModelETV4_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
B
Motif rank
0
ConsensusvdSAGGAARbd
Best auROC (human)0.819
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
HGNCHGNC:3493
EntrezGeneGeneID:2118
(SSTAR profile)
UniProt IDETV4_HUMAN
UniProt ACP43268
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.482570000000001
0.0005 6.459365
0.0001 7.96073
GTEx tissue expression atlas ETV4 expression
ReMap ChIP-seq dataset list ETV4 datasets
Motifs in JASPAR
MA0764.1 (ETV4; Homo sapiens)
PCM
ACGT
01168.0117.0165.050.0
02192.067.0160.081.0
0368.0305.0117.010.0
04478.05.010.07.0
053.01.0488.08.0
068.013.0479.00.0
07462.08.025.05.0
08435.07.023.035.0
09154.011.0294.041.0
1069.089.0173.0169.0
11144.066.0207.083.0
PWM
ACGT
010.293-0.0650.275-0.898
020.425-0.6130.244-0.427
03-0.5990.885-0.065-2.394
041.332-2.961-2.394-2.694
05-3.325-3.9031.353-2.584
06-2.584-2.1631.334-4.4
071.298-2.584-1.561-2.961
081.238-2.694-1.64-1.242
090.206-2.3110.848-1.09
10-0.584-0.3350.3220.298
110.14-0.6280.5-0.403