We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorETV5
(GeneCards)
ModelETV5_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
C
Motif rank
0
ConsensusvddvAGGRARddvv
Best auROC (human)0.867
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilyElk-like factors {3.5.2.2}
HGNCHGNC:3494
EntrezGeneGeneID:2119
(SSTAR profile)
UniProt IDETV5_HUMAN
UniProt ACP41161
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.51096
0.0005 6.31131
0.0001 7.910620000000001
GTEx tissue expression atlas ETV5 expression
ReMap ChIP-seq dataset list ETV5 datasets
Motifs in JASPAR
PCM
ACGT
01164.090.0191.055.0
02228.044.0164.064.0
03149.049.0247.055.0
04100.0209.0173.018.0
05420.018.042.020.0
068.03.0481.08.0
0722.08.0468.02.0
08397.034.051.018.0
09473.03.06.018.0
10186.031.0274.09.0
11114.050.0116.0220.0
12109.053.0269.069.0
13203.060.0193.044.0
14136.0108.0187.069.0
PWM
ACGT
010.269-0.3240.42-0.805
020.595-1.0220.269-0.658
030.174-0.9180.675-0.805
04-0.220.5090.322-1.868
051.203-1.868-1.067-1.77
06-2.584-3.3251.338-2.584
07-1.681-2.5841.311-3.573
081.147-1.27-0.879-1.868
091.322-3.325-2.819-1.868
100.393-1.3580.778-2.484
11-0.091-0.898-0.0740.56
12-0.135-0.8410.76-0.584
130.48-0.7210.43-1.022
140.083-0.1440.399-0.584